Literature DB >> 20809640

Fluorescence quenching by photoinduced electron transfer in the Zn2+ sensor zinpyr-1: a computational investigation.

Tim Kowalczyk1, Ziliang Lin, Troy Van Voorhis.   

Abstract

We report a detailed study of luminescence switching in the fluorescent zinc sensor Zinpyr-1 by density functional methods. A two-pronged approach employing both time-dependent density functional theory (TDDFT) and constrained density functional theory (CDFT) is used to characterize low-lying electronically excited states of the sensor. The calculations indicate that fluorescence activation in the sensor is governed by a photoinduced electron transfer mechanism in which the energy level ordering of the excited states is altered by binding Zn(2+). While the sensor is capable of binding two Zn(2+) cations, a single Zn(2+) ion appears to be sufficient to activate moderate fluorescence in aqueous solution at physiological pH. We show that it is reasonable to consider the tertiary amine as the effective electron donor in this system, although the pyridyl nitrogens each contribute some density to the xanthone ring. The calculations illustrate an important design principle: because protonation equilibria at receptor sites can play a determining role in the sensor's fluorescence response, receptor sites with a pK(a) near the pH of the sample are to be disfavored if a sensor governed by a simple PET fluorescence quenching model is desired.

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Year:  2010        PMID: 20809640     DOI: 10.1021/jp103153a

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  4 in total

1.  Understanding zinc quantification with existing and advanced ditopic fluorescent Zinpyr sensors.

Authors:  Daniela Buccella; Joshua A Horowitz; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2011-02-25       Impact factor: 15.419

2.  Visualization of peroxynitrite-induced changes of labile Zn2+ in the endoplasmic reticulum with benzoresorufin-based fluorescent probes.

Authors:  Wei Lin; Daniela Buccella; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2013-09-03       Impact factor: 15.419

3.  Transition-Based Constrained DFT for the Robust and Reliable Treatment of Excitations in Supramolecular Systems.

Authors:  Martina Stella; Kritam Thapa; Luigi Genovese; Laura E Ratcliff
Journal:  J Chem Theory Comput       Date:  2022-04-26       Impact factor: 6.578

4.  Covalently Fluorophore-Functionalized ZIF-8 Colloidal Particles as a Sensing Platform for Endocrine-Disrupting Chemicals Such as Phthalates Plasticizers.

Authors:  Ander Chapartegui-Arias; Jose A Villajos; Anett Myxa; Sebastian Beyer; Jana Falkenhagen; Rudolf J Schneider; Franziska Emmerling
Journal:  ACS Omega       Date:  2019-10-10
  4 in total

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