Literature DB >> 20802048

Complete genome sequence of Methanothermobacter marburgensis, a methanoarchaeon model organism.

Heiko Liesegang1, Anne-Kristin Kaster, Arnim Wiezer, Meike Goenrich, Antje Wollherr, Henning Seedorf, Gerhard Gottschalk, Rudolf K Thauer.   

Abstract

The circular genome sequence of the chemolithoautotrophic euryarchaeon Methanothermobacter marburgensis, with 1,639,135 bp, was determined and compared with that of Methanothermobacter thermautotrophicus. The genomes of the two model methanogens differ substantially in protein coding sequences, in insertion sequence (IS)-like elements, and in clustered regularly interspaced short palindromic repeats (CRISPR) loci.

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Year:  2010        PMID： 20802048      PMCID： PMC2953689          DOI： 10.1128/JB.00844-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  16 in total

Review 1.  Unusual coenzymes of methanogenesis.

Authors:  A A DiMarco; T A Bobik; R S Wolfe
Journal:  Annu Rev Biochem       Date:  1990       Impact factor: 23.643

2.  Phylogenetic analysis of 18 thermophilic Methanobacterium isolates supports the proposals to create a new genus, Methanothermobacter gen. nov., and to reclassify several isolates in three species, Methanothermobacter thermautotrophicus comb. nov., Methanothermobacter wolfeii comb. nov., and Methanothermobacter marburgensis sp. nov.

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Journal:  Int J Syst Evol Microbiol       Date:  2000-01       Impact factor: 2.747

Review 3.  Biochemistry of methanogenesis: a tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture.

Authors:  Rudolf K Thauer
Journal:  Microbiology (Reading)       Date:  1998-09       Impact factor: 2.777

4.  Complete nucleotide sequence of plasmid pME2001 of Methanobacterium thermoautotrophicum (Marburg).

Authors:  M Bokranz; A Klein; L Meile
Journal:  Nucleic Acids Res       Date:  1990-01-25       Impact factor: 16.971

5.  A general method applicable to the search for similarities in the amino acid sequence of two proteins.

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Journal:  J Mol Biol       Date:  1970-03       Impact factor: 5.469

6.  Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics.

Authors:  D R Smith; L A Doucette-Stamm; C Deloughery; H Lee; J Dubois; T Aldredge; R Bashirzadeh; D Blakely; R Cook; K Gilbert; D Harrison; L Hoang; P Keagle; W Lumm; B Pothier; D Qiu; R Spadafora; R Vicaire; Y Wang; J Wierzbowski; R Gibson; N Jiwani; A Caruso; D Bush; J N Reeve
Journal:  J Bacteriol       Date:  1997-11       Impact factor: 3.490

Review 7.  Hydrogenases from methanogenic archaea, nickel, a novel cofactor, and H2 storage.

Authors:  Rudolf K Thauer; Anne-Kristin Kaster; Meike Goenrich; Michael Schick; Takeshi Hiromoto; Seigo Shima
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

8.  Organization of Methanobacterium thermoautotrophicum bacteriophage psi M1 DNA.

Authors:  M Jordan; L Meile; T Leisinger
Journal:  Mol Gen Genet       Date:  1989-12

9.  Methanobacterium thermoautotrophicus sp. n., an anaerobic, autotrophic, extreme thermophile.

Authors:  J G Zeikus; R S Wolfe
Journal:  J Bacteriol       Date:  1972-02       Impact factor: 3.490

10.  Acetate assimilation and the synthesis of alanine, aspartate and glutamate in Methanobacterium thermoautotrophicum.

Authors:  G Fuchs; E Stupperich; R K Thauer
Journal:  Arch Microbiol       Date:  1978-04-27       Impact factor: 2.552
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  13 in total

1.  Identifying novel protein phenotype annotations by hybridizing protein-protein interactions and protein sequence similarities.

Authors:  Lei Chen; Yu-Hang Zhang; Tao Huang; Yu-Dong Cai
Journal:  Mol Genet Genomics       Date:  2016-01-04       Impact factor: 3.291

2.  More than 200 genes required for methane formation from H₂ and CO₂ and energy conservation are present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus.

Authors:  Anne-Kristin Kaster; Meike Goenrich; Henning Seedorf; Heiko Liesegang; Antje Wollherr; Gerhard Gottschalk; Rudolf K Thauer
Journal:  Archaea       Date:  2011-04-27       Impact factor: 3.273

3.  A novel cytosolic NADH:quinone oxidoreductase from Methanothermobacter marburgensis.

Authors:  Eva Ullmann; Tien Chye Tan; Thomas Gundinger; Christoph Herwig; Christina Divne; Oliver Spadiut
Journal:  Biosci Rep       Date:  2014-12-23       Impact factor: 3.840

4.  The Draft Genome of the Non-Host-Associated Methanobrevibacter arboriphilus Strain DH1 Encodes a Large Repertoire of Adhesin-Like Proteins.

Authors:  Anja Poehlein; Rolf Daniel; Henning Seedorf
Journal:  Archaea       Date:  2017-05-28       Impact factor: 3.273

5.  Comparative Genomic Analysis of Members of the Genera Methanosphaera and Methanobrevibacter Reveals Distinct Clades with Specific Potential Metabolic Functions.

Authors:  Anja Poehlein; Dominik Schneider; Melissa Soh; Rolf Daniel; Henning Seedorf
Journal:  Archaea       Date:  2018-08-19       Impact factor: 3.273

6.  De novo modeling of the F(420)-reducing [NiFe]-hydrogenase from a methanogenic archaeon by cryo-electron microscopy.

Authors:  Deryck J Mills; Stella Vitt; Mike Strauss; Seigo Shima; Janet Vonck
Journal:  Elife       Date:  2013-03-05       Impact factor: 8.140

7.  In vivo activation of methyl-coenzyme M reductase by carbon monoxide.

Authors:  Yuzhen Zhou; Alexandria E Dorchak; Stephen W Ragsdale
Journal:  Front Microbiol       Date:  2013-04-01       Impact factor: 5.640

8.  Proteomic Analysis of the Hydrogen and Carbon Monoxide Metabolism of Methanothermobacter marburgensis.

Authors:  Martijn Diender; Ricardo Pereira; Hans J C T Wessels; Alfons J M Stams; Diana Z Sousa
Journal:  Front Microbiol       Date:  2016-07-04       Impact factor: 5.640

9.  Draft Genome Sequence of Methanothermobacter sp. Strain EMTCatA1, Reconstructed from the Metagenome of a Thermophilic Electromethanogenesis-Catalyzing Biocathode.

Authors:  Hajime Kobayashi; Xiaohan Sun; Qian Fu; Haruo Maeda; Kozo Sato
Journal:  Genome Announc       Date:  2017-08-31

10.  Cofactor Tail Length Modulates Catalysis of Bacterial F420-Dependent Oxidoreductases.

Authors:  Blair Ney; Carlo R Carere; Richard Sparling; Thanavit Jirapanjawat; Matthew B Stott; Colin J Jackson; John G Oakeshott; Andrew C Warden; Chris Greening
Journal:  Front Microbiol       Date:  2017-09-27       Impact factor: 5.640
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