Literature DB >> 20802032

Complete genome sequence of Mycoplasma hyorhinis strain HUB-1.

Wei Liu1, Liurong Fang, Sha Li, Qiang Li, Zhemin Zhou, Zhixin Feng, Rui Luo, Guoqing Shao, Lei Wang, Huanchun Chen, Shaobo Xiao.   

Abstract

Mycoplasma hyorhinis is generally considered a swine pathogen yet is most commonly found infecting laboratory cell lines. An increasing body of evidence suggests that chronic infections with M. hyorhinis may cause oncogenic transformation. Here, we announce the complete genome sequence of M. hyorhinis strain HUB-1.

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Year:  2010        PMID： 20802032      PMCID： PMC2953675          DOI： 10.1128/JB.00946-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

3.  p37 Induces tumor invasiveness.

Authors:  Catherine M Ketcham; Satoshi Anai; Robbie Reutzel; Shijie Sheng; Sheldon M Schuster; Ryan B Brenes; Mavis Agbandje-McKenna; Robert McKenna; Charles J Rosser; Susan K Boehlein
Journal:  Mol Cancer Ther       Date:  2005-07       Impact factor: 6.261

4.  Increased structural and combinatorial diversity in an extended family of genes encoding Vlp surface proteins of Mycoplasma hyorhinis.

Authors:  D Yogev; R Watson-McKown; R Rosengarten; J Im; K S Wise
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

Review 5.  Molecular biology and pathogenicity of mycoplasmas.

Authors:  S Razin; D Yogev; Y Naot
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

6.  Mycoplasma hyorhinis upregulates calpastatin and inhibits calpain-dependent proteolysis in SH-SY5Y neuroblastoma cells.

Authors:  Esther Elkind; Hagai Rechnitzer; Tali Vaisid; Jonathan D Kornspan; Sivia Barnoy; Shlomo Rottem; Nechama S Kosower
Journal:  FEMS Microbiol Lett       Date:  2010-01-20       Impact factor: 2.742

7.  Persistent exposure to Mycoplasma induces malignant transformation of human prostate cells.

Authors:  Kazunori Namiki; Steve Goodison; Stacy Porvasnik; Robert W Allan; Kenneth A Iczkowski; Cydney Urbanek; Leticia Reyes; Noboru Sakamoto; Charles J Rosser
Journal:  PLoS One       Date:  2009-09-01       Impact factor: 3.240

8.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

9.  Accurate whole human genome sequencing using reversible terminator chemistry.

Authors:  David R Bentley; Shankar Balasubramanian; Harold P Swerdlow; Geoffrey P Smith; John Milton; Clive G Brown; Kevin P Hall; Dirk J Evers; Colin L Barnes; Helen R Bignell; Jonathan M Boutell; Jason Bryant; Richard J Carter; R Keira Cheetham; Anthony J Cox; Darren J Ellis; Michael R Flatbush; Niall A Gormley; Sean J Humphray; Leslie J Irving; Mirian S Karbelashvili; Scott M Kirk; Heng Li; Xiaohai Liu; Klaus S Maisinger; Lisa J Murray; Bojan Obradovic; Tobias Ost; Michael L Parkinson; Mark R Pratt; Isabelle M J Rasolonjatovo; Mark T Reed; Roberto Rigatti; Chiara Rodighiero; Mark T Ross; Andrea Sabot; Subramanian V Sankar; Aylwyn Scally; Gary P Schroth; Mark E Smith; Vincent P Smith; Anastassia Spiridou; Peta E Torrance; Svilen S Tzonev; Eric H Vermaas; Klaudia Walter; Xiaolin Wu; Lu Zhang; Mohammed D Alam; Carole Anastasi; Ify C Aniebo; David M D Bailey; Iain R Bancarz; Saibal Banerjee; Selena G Barbour; Primo A Baybayan; Vincent A Benoit; Kevin F Benson; Claire Bevis; Phillip J Black; Asha Boodhun; Joe S Brennan; John A Bridgham; Rob C Brown; Andrew A Brown; Dale H Buermann; Abass A Bundu; James C Burrows; Nigel P Carter; Nestor Castillo; Maria Chiara E Catenazzi; Simon Chang; R Neil Cooley; Natasha R Crake; Olubunmi O Dada; Konstantinos D Diakoumakos; Belen Dominguez-Fernandez; David J Earnshaw; Ugonna C Egbujor; David W Elmore; Sergey S Etchin; Mark R Ewan; Milan Fedurco; Louise J Fraser; Karin V Fuentes Fajardo; W Scott Furey; David George; Kimberley J Gietzen; Colin P Goddard; George S Golda; Philip A Granieri; David E Green; David L Gustafson; Nancy F Hansen; Kevin Harnish; Christian D Haudenschild; Narinder I Heyer; Matthew M Hims; Johnny T Ho; Adrian M Horgan; Katya Hoschler; Steve Hurwitz; Denis V Ivanov; Maria Q Johnson; Terena James; T A Huw Jones; Gyoung-Dong Kang; Tzvetana H Kerelska; Alan D Kersey; Irina Khrebtukova; Alex P Kindwall; Zoya Kingsbury; Paula I Kokko-Gonzales; Anil Kumar; Marc A Laurent; Cynthia T Lawley; Sarah E Lee; Xavier Lee; Arnold K Liao; Jennifer A Loch; Mitch Lok; Shujun Luo; Radhika M Mammen; John W Martin; Patrick G McCauley; Paul McNitt; Parul Mehta; Keith W Moon; Joe W Mullens; Taksina Newington; Zemin Ning; Bee Ling Ng; Sonia M Novo; Michael J O'Neill; Mark A Osborne; Andrew Osnowski; Omead Ostadan; Lambros L Paraschos; Lea Pickering; Andrew C Pike; Alger C Pike; D Chris Pinkard; Daniel P Pliskin; Joe Podhasky; Victor J Quijano; Come Raczy; Vicki H Rae; Stephen R Rawlings; Ana Chiva Rodriguez; Phyllida M Roe; John Rogers; Maria C Rogert Bacigalupo; Nikolai Romanov; Anthony Romieu; Rithy K Roth; Natalie J Rourke; Silke T Ruediger; Eli Rusman; Raquel M Sanches-Kuiper; Martin R Schenker; Josefina M Seoane; Richard J Shaw; Mitch K Shiver; Steven W Short; Ning L Sizto; Johannes P Sluis; Melanie A Smith; Jean Ernest Sohna Sohna; Eric J Spence; Kim Stevens; Neil Sutton; Lukasz Szajkowski; Carolyn L Tregidgo; Gerardo Turcatti; Stephanie Vandevondele; Yuli Verhovsky; Selene M Virk; Suzanne Wakelin; Gregory C Walcott; Jingwen Wang; Graham J Worsley; Juying Yan; Ling Yau; Mike Zuerlein; Jane Rogers; James C Mullikin; Matthew E Hurles; Nick J McCooke; John S West; Frank L Oaks; Peter L Lundberg; David Klenerman; Richard Durbin; Anthony J Smith
Journal:  Nature       Date:  2008-11-06       Impact factor: 49.962
  9 in total
  16 in total

1.  Genome sequence of Mycoplasma hyorhinis strain GDL-1.

Authors:  Michael J Calcutt; Mark F Foecking; Ruben S Rosales; Richard J Ellis; Robin A J Nicholas
Journal:  J Bacteriol       Date:  2012-04       Impact factor: 3.490

2.  Genome analysis of a Mycoplasma hyorhinis strain derived from a primary human melanoma cell line.

Authors:  Jonathan D Kornspan; Inna Lysnyansky; Tamar Kahan; Richard Herrmann; Shlomo Rottem; Ran Nir-Paz
Journal:  J Bacteriol       Date:  2011-06-24       Impact factor: 3.490

3.  Complete genome sequence of Mycoplasma hyopneumoniae strain 168.

Authors:  Wei Liu; Zhixin Feng; Liurong Fang; Zhemin Zhou; Qiang Li; Sha Li; Rui Luo; Lei Wang; Huanchun Chen; Guoqing Shao; Shaobo Xiao
Journal:  J Bacteriol       Date:  2010-12-10       Impact factor: 3.490

4.  Multilocus sequence typing of Mycoplasma hyorhinis strains identified by a real-time TaqMan PCR assay.

Authors:  Véronique Tocqueville; Séverine Ferré; Ngoc Hong Phuc Nguyen; Isabelle Kempf; Corinne Marois-Créhan
Journal:  J Clin Microbiol       Date:  2014-03-12       Impact factor: 5.948

5.  Comparative genomics of Mycoplasma: analysis of conserved essential genes and diversity of the pan-genome.

Authors:  Wei Liu; Liurong Fang; Mao Li; Sha Li; Shaohua Guo; Rui Luo; Zhixin Feng; Bin Li; Zhemin Zhou; Guoqing Shao; Huanchun Chen; Shaobo Xiao
Journal:  PLoS One       Date:  2012-04-20       Impact factor: 3.240

6.  Complexity of the Mycoplasma fermentans M64 genome and metabolic essentiality and diversity among mycoplasmas.

Authors:  Hung-Wei Shu; Tze-Tze Liu; Huang-I Chan; Yen-Ming Liu; Keh-Ming Wu; Hung-Yu Shu; Shih-Feng Tsai; Kwang-Jen Hsiao; Wensi S Hu; Wailap Victor Ng
Journal:  PLoS One       Date:  2012-04-03       Impact factor: 3.240

7.  Genome Sequence of Mycoplasma hyorhinis Strain DBS 1050.

Authors:  Alena Dabrazhynetskaya; Valerii Soika; Dmitriy Volokhov; Vahan Simonyan; Vladimir Chizhikov
Journal:  Genome Announc       Date:  2014-03-06

8.  Unravelling the transcriptome profile of the Swine respiratory tract mycoplasmas.

Authors:  Franciele Maboni Siqueira; Alexandra Lehmkuhl Gerber; Rafael Lucas Muniz Guedes; Luiz Gonzaga Almeida; Irene Silveira Schrank; Ana Tereza Ribeiro Vasconcelos; Arnaldo Zaha
Journal:  PLoS One       Date:  2014-10-15       Impact factor: 3.240

9.  Complete Genome Sequence of Mycoplasma hyorhinis Strain SK76.

Authors:  Steve Goodison; Virginia Urquidi; Dibyendu Kumar; Leticia Reyes; Charles J Rosser
Journal:  Genome Announc       Date:  2013-02-07

10.  New insights on the biology of swine respiratory tract mycoplasmas from a comparative genome analysis.

Authors:  Franciele Maboni Siqueira; Claudia Elizabeth Thompson; Veridiana Gomes Virginio; Taylor Gonchoroski; Luciano Reolon; Luiz Gonzaga Almeida; Marbella Maria da Fonsêca; Rangel de Souza; Francisco Prosdocimi; Irene Silveira Schrank; Henrique Bunselmeyer Ferreira; Ana Tereza Ribeiro de Vasconcelos; Arnaldo Zaha
Journal:  BMC Genomics       Date:  2013-03-14       Impact factor: 3.969
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