Literature DB >> 20800708

Structure characterization of the 26S proteasome.

Ho Min Kim1, Yadong Yu, Yifan Cheng.   

Abstract

In all eukaryotic cells, 26S proteasome plays an essential role in the process of ATP-dependent protein degradation. In this review, we focus on structure characterization of the 26S proteasome. Although the progress towards a high-resolution structure of the 26S proteasome has been slow, the recently solved structures of various proteasomal subcomplexes have greatly enhanced our understanding of this large machinery. In addition to having an ATP-dependent proteolytic function, the 26S proteasome is also involved in many non-proteolytic cellular activities, which are often mediated by subunits in its 19S regulatory complex. Thus, we include a detailed discussion of the structures of 19S subunits, including proteasomal ATPases, ubiquitin receptors, deubiquitinating enzymes and subunits that contain PCI domain. This article is part of a Special Issue entitled The 26S Proteasome: When degradation is just not enough!
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20800708      PMCID: PMC3010250          DOI: 10.1016/j.bbagrm.2010.08.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  163 in total

1.  What curves alpha-solenoids? Evidence for an alpha-helical toroid structure of Rpn1 and Rpn2 proteins of the 26 S proteasome.

Authors:  Andrey V Kajava
Journal:  J Biol Chem       Date:  2002-09-20       Impact factor: 5.157

Review 2.  In the land of the rising sun with the COP9 signalosome and related Zomes. Symposium on the COP9 signalosome, Proteasome and eIF3.

Authors:  Elah Pick; Lionel Pintard
Journal:  EMBO Rep       Date:  2009-03-13       Impact factor: 8.807

3.  Symmetrical modularity of the COP9 signalosome complex suggests its multifunctionality.

Authors:  Michal Sharon; Haibin Mao; Elisabetta Boeri Erba; Elaine Stephens; Ning Zheng; Carol V Robinson
Journal:  Structure       Date:  2009-01-14       Impact factor: 5.006

4.  Differential roles of the COOH termini of AAA subunits of PA700 (19 S regulator) in asymmetric assembly and activation of the 26 S proteasome.

Authors:  Thomas G Gillette; Brajesh Kumar; David Thompson; Clive A Slaughter; George N DeMartino
Journal:  J Biol Chem       Date:  2008-09-16       Impact factor: 5.157

5.  Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains.

Authors:  Yusuke Sato; Azusa Yoshikawa; Atsushi Yamagata; Hisatoshi Mimura; Masami Yamashita; Kayoko Ookata; Osamu Nureki; Kazuhiro Iwai; Masayuki Komada; Shuya Fukai
Journal:  Nature       Date:  2008-08-31       Impact factor: 49.962

6.  Multiple associated proteins regulate proteasome structure and function.

Authors:  David S Leggett; John Hanna; Anna Borodovsky; Bernat Crosas; Marion Schmidt; Rohan T Baker; Thomas Walz; Hidde Ploegh; Daniel Finley
Journal:  Mol Cell       Date:  2002-09       Impact factor: 17.970

7.  The Arabidopsis COP9 signalosome subunit 7 is a model PCI domain protein with subdomains involved in COP9 signalosome assembly.

Authors:  Moshe Dessau; Yair Halimi; Tamir Erez; Orna Chomsky-Hecht; Daniel A Chamovitz; Joel A Hirsch
Journal:  Plant Cell       Date:  2008-10-14       Impact factor: 11.277

8.  Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3.

Authors:  Min Zhou; Alan M Sandercock; Christopher S Fraser; Gabriela Ridlova; Elaine Stephens; Matthew R Schenauer; Theresa Yokoi-Fong; Daniel Barsky; Julie A Leary; John W Hershey; Jennifer A Doudna; Carol V Robinson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-01       Impact factor: 11.205

9.  A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing.

Authors:  Gwendolyn M Wilmes; Megan Bergkessel; Sourav Bandyopadhyay; Michael Shales; Hannes Braberg; Gerard Cagney; Sean R Collins; Gregg B Whitworth; Tracy L Kress; Jonathan S Weissman; Trey Ideker; Christine Guthrie; Nevan J Krogan
Journal:  Mol Cell       Date:  2008-12-05       Impact factor: 17.970

10.  Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery.

Authors:  Marius Boulos Faza; Stefan Kemmler; Sonia Jimeno; Cristina González-Aguilera; Andrés Aguilera; Ed Hurt; Vikram Govind Panse
Journal:  J Cell Biol       Date:  2009-03-16       Impact factor: 10.539

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  29 in total

1.  Regulation of the ubiquitylation and deubiquitylation of CREB-binding protein modulates histone acetylation and lung inflammation.

Authors:  Jianxin Wei; Su Dong; Rachel K Bowser; Andrew Khoo; Lina Zhang; Anastasia M Jacko; Yutong Zhao; Jing Zhao
Journal:  Sci Signal       Date:  2017-06-13       Impact factor: 8.192

Review 2.  Oxidative stress-mediated regulation of proteasome complexes.

Authors:  Charity T Aiken; Robyn M Kaake; Xiaorong Wang; Lan Huang
Journal:  Mol Cell Proteomics       Date:  2011-05       Impact factor: 5.911

Review 3.  State of the APC/C: organization, function, and structure.

Authors:  Janel R McLean; Denis Chaix; Melanie D Ohi; Kathleen L Gould
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-01-24       Impact factor: 8.250

4.  The 19S proteasome is directly involved in the regulation of heterochromatin spreading in fission yeast.

Authors:  Hogyu David Seo; Yoonjung Choi; Minhoo Kim; Keunsoo Kang; Takeshi Urano; Daeyoup Lee
Journal:  J Biol Chem       Date:  2017-08-07       Impact factor: 5.157

5.  Molecular characterization and expressional affirmation of the beta proteasome subunit cluster in rock bream immune defense.

Authors:  Saranya Revathy Kasthuri; Navaneethaiyer Umasuthan; Ilson Whang; Bong-Soo Lim; Hyung-Bok Jung; Myung-Joo Oh; Sung-Ju Jung; Sang-Yeob Yeo; Sung Yeon Kim; Jehee Lee
Journal:  Mol Biol Rep       Date:  2014-05-28       Impact factor: 2.316

6.  Bufalin derivative BF211 inhibits proteasome activity in human lung cancer cells in vitro by inhibiting β1 subunit expression and disrupting proteasome assembly.

Authors:  Peng Sun; Li-Xing Feng; Dong-Mei Zhang; Miao Liu; Wang Liu; Tian Mi; Wan-Ying Wu; Bao-Hong Jiang; Min Yang; Li-Hong Hu; De-An Guo; Xuan Liu
Journal:  Acta Pharmacol Sin       Date:  2016-05-30       Impact factor: 6.150

Review 7.  Ubiquitin-independent proteasomal degradation during oncogenic viral infections.

Authors:  Jiwon Hwang; Laura Winkler; Robert F Kalejta
Journal:  Biochim Biophys Acta       Date:  2011-06-06

8.  Differential Alterations in Metabolism and Proteolysis-Related Proteins in Human Parkinson's Disease Substantia Nigra.

Authors:  Edna Grünblatt; Josefine Ruder; Camelia Maria Monoranu; Peter Riederer; Moussa Bh Youdim; Silvia A Mandel
Journal:  Neurotox Res       Date:  2017-12-07       Impact factor: 3.911

9.  Overexpression of USP14 protease reduces I-κB protein levels and increases cytokine release in lung epithelial cells.

Authors:  Rachel K Mialki; Jing Zhao; Jianxin Wei; Daniel F Mallampalli; Yutong Zhao
Journal:  J Biol Chem       Date:  2013-04-24       Impact factor: 5.157

10.  GENERAL CONTROL NONREPRESSIBLE4 Degrades 14-3-3 and the RIN4 Complex to Regulate Stomatal Aperture with Implications on Nonhost Disease Resistance and Drought Tolerance.

Authors:  Amita Kaundal; Vemanna S Ramu; Sunhee Oh; Seonghee Lee; Bikram Pant; Hee-Kyung Lee; Clemencia M Rojas; Muthappa Senthil-Kumar; Kirankumar S Mysore
Journal:  Plant Cell       Date:  2017-08-30       Impact factor: 11.277

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