Literature DB >> 20800072

Determining the parametric structure of models.

D J Cole1, B J T Morgan, D M Titterington.   

Abstract

In this paper we develop a comprehensive approach to determining the parametric structure of models. This involves considering whether a model is parameter redundant or not and investigating model identifiability. The approach adopted makes use of exhaustive summaries, quantities that uniquely define the model. We review and generalise previous work on evaluating the symbolic rank of an appropriate derivative matrix to detect parameter redundancy, and then develop further tools for use within this framework, based on a matrix decomposition. Complex models, where the symbolic rank is difficult to calculate, may be simplified structurally using reparameterisation and by finding a reduced-form exhaustive summary. The approach of the paper is illustrated using examples from ecology, compartment modelling and Bayes networks. This work is topical as models in the biosciences and elsewhere are becoming increasingly complex.
Copyright © 2010 Elsevier Inc. All rights reserved.

Mesh:

Substances:

Year:  2010        PMID: 20800072     DOI: 10.1016/j.mbs.2010.08.004

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  7 in total

1.  A review of Bayesian state-space modelling of capture-recapture-recovery data.

Authors:  Ruth King
Journal:  Interface Focus       Date:  2012-01-25       Impact factor: 3.906

2.  Does your species have memory? Analyzing capture-recapture data with memory models.

Authors:  Diana J Cole; Byron J T Morgan; Rachel S McCrea; Roger Pradel; Olivier Gimenez; Remi Choquet
Journal:  Ecol Evol       Date:  2014-04-30       Impact factor: 2.912

3.  Determining minimal output sets that ensure structural identifiability.

Authors:  D Joubert; J D Stigter; J Molenaar
Journal:  PLoS One       Date:  2018-11-12       Impact factor: 3.240

4.  Structural identifiability analysis of age-structured PDE epidemic models.

Authors:  Marissa Renardy; Denise Kirschner; Marisa Eisenberg
Journal:  J Math Biol       Date:  2022-01-04       Impact factor: 2.259

5.  A simple method for identifying parameter correlations in partially observed linear dynamic models.

Authors:  Pu Li; Quoc Dong Vu
Journal:  BMC Syst Biol       Date:  2015-12-14

6.  Parameter redundancy in discrete state-space and integrated models.

Authors:  Diana J Cole; Rachel S McCrea
Journal:  Biom J       Date:  2016-06-30       Impact factor: 2.207

7.  Best Practices to Maximize the Use and Reuse of Quantitative and Systems Pharmacology Models: Recommendations From the United Kingdom Quantitative and Systems Pharmacology Network.

Authors:  Lourdes Cucurull-Sanchez; Michael J Chappell; Vijayalakshmi Chelliah; S Y Amy Cheung; Gianne Derks; Mark Penney; Alex Phipps; Rahuman S Malik-Sheriff; Jon Timmis; Marcus J Tindall; Piet H van der Graaf; Paolo Vicini; James W T Yates
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2019-03-22
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.