Literature DB >> 20739176

From structure to cellular mechanism with infrared microspectroscopy.

Lisa M Miller1, Paul Dumas.   

Abstract

Current efforts in structural biology aim to integrate structural information within the context of cellular organization and function. X-rays and infrared radiation stand at opposite ends of the electromagnetic spectrum and act as complementary probes for achieving this goal. Intense and bright beams are produced by synchrotron radiation, and are efficiently used in the wavelength domain extending from hard X-rays to the far-infrared (or THz) regime. While X-ray crystallography provides exquisite details on atomic structure, Fourier transform infrared microspectroscopy (FTIRM) is emerging as a spectroscopic probe and imaging tool for correlating molecular structure to biochemical dynamics and function. In this manuscript, the role of synchrotron FTIRM in bridging the gap towards 'functional biology' is discussed based upon recent achievements, with a critical assessment of the contributions to biological and biomedical research. Published by Elsevier Ltd.

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Mesh:

Year:  2010        PMID: 20739176      PMCID: PMC4140183          DOI: 10.1016/j.sbi.2010.07.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  48 in total

1.  Spatially resolved IR microspectroscopy of single cells.

Authors:  Peter Lasch; Anthony Pacifico; Max Diem
Journal:  Biopolymers       Date:  2002       Impact factor: 2.505

2.  Alpha-helix formation in a photoswitchable peptide tracked from picoseconds to microseconds by time-resolved IR spectroscopy.

Authors:  Jens Bredenbeck; Jan Helbing; Janet R Kumita; G Andrew Woolley; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-07       Impact factor: 11.205

3.  Differentiation of individual human mesenchymal stem cells probed by FTIR microscopic imaging.

Authors:  Christoph Krafft; Reiner Salzer; Sebastian Seitz; Christina Ern; Matthias Schieker
Journal:  Analyst       Date:  2007-05-24       Impact factor: 4.616

4.  Real-time molecular monitoring of chemical environment in obligate anaerobes during oxygen adaptive response.

Authors:  Hoi-Ying N Holman; Eleanor Wozei; Zhang Lin; Luis R Comolli; David A Ball; Sharon Borglin; Matthew W Fields; Terry C Hazen; Kenneth H Downing
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-16       Impact factor: 11.205

5.  Fourier transform infrared imaging showing reduced unsaturated lipid content in the hippocampus of a mouse model of Alzheimer's disease.

Authors:  Andreana C Leskovjan; Ariane Kretlow; Lisa M Miller
Journal:  Anal Chem       Date:  2010-04-01       Impact factor: 6.986

6.  Highly resolved chemical imaging of living cells by using synchrotron infrared microspectrometry.

Authors:  N Jamin; P Dumas; J Moncuit; W H Fridman; J L Teillaud; G L Carr; G P Williams
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

7.  Beta-amyloid deposition and Alzheimer's type changes induced by Borrelia spirochetes.

Authors:  Judith Miklossy; Andras Kis; Alexandra Radenovic; Lisa Miller; Laszlo Forro; Ralph Martins; Krzysztof Reiss; Nune Darbinian; Pushpa Darekar; Laszlo Mihaly; Kamel Khalili
Journal:  Neurobiol Aging       Date:  2006-02       Impact factor: 4.673

8.  Changes in protein structure and distribution observed at pre-clinical stages of scrapie pathogenesis.

Authors:  Ariane Kretlow; Qi Wang; Michael Beekes; Dieter Naumann; Lisa M Miller
Journal:  Biochim Biophys Acta       Date:  2008-06-14

9.  Scrapie-infected cells, isolated prions, and recombinant prion protein: a comparative study.

Authors:  J Kneipp; L M Miller; S Spassov; F Sokolowski; P Lasch; M Beekes; D Naumann
Journal:  Biopolymers       Date:  2004 May-Jun 5       Impact factor: 2.505

10.  Chemical heterogeneity in cell death: combined synchrotron IR and fluorescence microscopy studies of single apoptotic and necrotic cells.

Authors:  Nadège Jamin; Lisa Miller; Janine Moncuit; Wolf-Herman Fridman; Paul Dumas; Jean-Luc Teillaud
Journal:  Biopolymers       Date:  2003       Impact factor: 2.505

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  25 in total

1.  New technologies for 21st century plant science.

Authors:  David W Ehrhardt; Wolf B Frommer
Journal:  Plant Cell       Date:  2012-02-24       Impact factor: 11.277

Review 2.  Vibrational spectroscopy and imaging: applications for tissue engineering.

Authors:  William Querido; Jessica M Falcon; Shital Kandel; Nancy Pleshko
Journal:  Analyst       Date:  2017-10-23       Impact factor: 4.616

3.  High-resolution infrared imaging of biological samples with third-order sum-frequency generation microscopy.

Authors:  Adam M Hanninen; Richard C Prince; Raul Ramos; Maksim V Plikus; Eric O Potma
Journal:  Biomed Opt Express       Date:  2018-09-13       Impact factor: 3.732

Review 4.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

Authors:  Francois-Xavier Theillet; Andres Binolfi; Tamara Frembgen-Kesner; Karan Hingorani; Mohona Sarkar; Ciara Kyne; Conggang Li; Peter B Crowley; Lila Gierasch; Gary J Pielak; Adrian H Elcock; Anne Gershenson; Philipp Selenko
Journal:  Chem Rev       Date:  2014-06-05       Impact factor: 60.622

5.  Assessing two-way interactions between cells and inorganic nanoparticles.

Authors:  C Cristallini; N Barbani; S Bianchi; S Maltinti; A Baldassare; R Ishak; M Onor; L Ambrosio; V Castelvetro; M G Cascone
Journal:  J Mater Sci Mater Med       Date:  2019-12-05       Impact factor: 3.896

6.  Characterization of Protein Structural Changes in Living Cells Using Time-Lapsed FTIR Imaging.

Authors:  Paul Gelfand; Randy J Smith; Eli Stavitski; David R Borchelt; Lisa M Miller
Journal:  Anal Chem       Date:  2015-05-28       Impact factor: 6.986

7.  Synchrotron Infrared and Deep UV Fluorescent Microspectroscopy Study of PB1-F2 β-Aggregated Structures in Influenza A Virus-infected Cells.

Authors:  Christophe Chevalier; Ronan Le Goffic; Frédéric Jamme; Olivier Leymarie; Matthieu Réfrégiers; Bernard Delmas
Journal:  J Biol Chem       Date:  2016-02-19       Impact factor: 5.157

8.  Grading of intrinsic and acquired cisplatin-resistant human melanoma cell lines: an infrared ATR study.

Authors:  A Zwielly; S Mordechai; G Brkic; E Bogomolny; I Z Pelly; R Moreh; J Gopas
Journal:  Eur Biophys J       Date:  2011-04-07       Impact factor: 1.733

9.  Assessment of metabolic modulation in free-living versus endosymbiotic Symbiodinium using synchrotron radiation-based infrared microspectroscopy.

Authors:  Shao-En Peng; Chii-Shiarng Chen; Yen-Fang Song; Huai-Ting Huang; Pei-Luen Jiang; Wan-Nan U Chen; Lee-Shing Fang; Yao-Chang Lee
Journal:  Biol Lett       Date:  2011-11-16       Impact factor: 3.703

10.  Infrared microspectroscopy identifies biomolecular changes associated with chronic oxidative stress in mammary epithelium and stroma of breast tissues from healthy young women: implications for latent stages of breast carcinogenesis.

Authors:  Imran I Patel; Debra A Shearer; Simon W Fogarty; Nigel J Fullwood; Luca Quaroni; Francis L Martin; Judith Weisz
Journal:  Cancer Biol Ther       Date:  2013-11-01       Impact factor: 4.742

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