Literature DB >> 20735564

The campaign to DNA barcode all fishes, FISH-BOL.

R D Ward1, R Hanner, P D N Hebert.   

Abstract

FISH-BOL, the Fish Barcode of Life campaign, is an international research collaboration that is assembling a standardized reference DNA sequence library for all fishes. Analysis is targeting a 648 base pair region of the mitochondrial cytochrome c oxidase I (COI) gene. More than 5000 species have already been DNA barcoded, with an average of five specimens per species, typically vouchers with authoritative identifications. The barcode sequence from any fish, fillet, fin, egg or larva can be matched against these reference sequences using BOLD; the Barcode of Life Data System (http://www.barcodinglife.org). The benefits of barcoding fishes include facilitating species identification, highlighting cases of range expansion for known species, flagging previously overlooked species and enabling identifications where traditional methods cannot be applied. Results thus far indicate that barcodes separate c. 98 and 93% of already described marine and freshwater fish species, respectively. Several specimens with divergent barcode sequences have been confirmed by integrative taxonomic analysis as new species. Past concerns in relation to the use of fish barcoding for species discrimination are discussed. These include hybridization, recent radiations, regional differentiation in barcode sequences and nuclear copies of the barcode region. However, current results indicate these issues are of little concern for the great majority of specimens.

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Year:  2009        PMID: 20735564     DOI: 10.1111/j.1095-8649.2008.02080.x

Source DB:  PubMed          Journal:  J Fish Biol        ISSN: 0022-1112            Impact factor:   2.051


  122 in total

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3.  Molecular identification of a cryptic species in the Amazonian predatory catfish genus Pseudoplatystoma (Bleeker, 1962) from Peru.

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Journal:  Genetica       Date:  2013-09-06       Impact factor: 1.082

4.  Genetic calibration of species diversity among North America's freshwater fishes.

Authors:  Julien April; Richard L Mayden; Robert H Hanner; Louis Bernatchez
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Review 5.  The life aquatic: advances in marine vertebrate genomics.

Authors:  Joanna L Kelley; Anthony P Brown; Nina Overgaard Therkildsen; Andrew D Foote
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6.  Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes.

Authors:  Victor A Tagliacollo; Maxwell J Bernt; Jack M Craig; Claudio Oliveira; James S Albert
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7.  An integrative framework to reevaluate the Neotropical catfish genus Guyanancistrus (Siluriformes: Loricariidae) with particular emphasis on the Guyanancistrus brevispinis complex.

Authors:  Sonia Fisch-Muller; Jan H A Mol; Raphaël Covain
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8.  Comparative performances of DNA barcoding across insect orders.

Authors:  Massimiliano Virgilio; Thierry Backeljau; Bruno Nevado; Marc De Meyer
Journal:  BMC Bioinformatics       Date:  2010-04-27       Impact factor: 3.169

9.  Identifying Fishes through DNA Barcodes and Microarrays.

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Journal:  PLoS One       Date:  2010-09-07       Impact factor: 3.240

10.  Barcoding nemo: DNA-based identifications for the ornamental fish trade.

Authors:  Dirk Steinke; Tyler S Zemlak; Paul D N Hebert
Journal:  PLoS One       Date:  2009-07-21       Impact factor: 3.240

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