Literature DB >> 20726799

Lectin microarrays for glycomic analysis.

Garima Gupta1, Avadhesha Surolia, Srinivasa-Gopalan Sampathkumar.   

Abstract

Glycomics is the study of comprehensive structural elucidation and characterization of all glycoforms found in nature and their dynamic spatiotemporal changes that are associated with biological processes. Glycocalyx of mammalian cells actively participate in cell-cell, cell-matrix, and cell-pathogen interactions, which impact embryogenesis, growth and development, homeostasis, infection and immunity, signaling, malignancy, and metabolic disorders. Relative to genomics and proteomics, glycomics is just growing out of infancy with great potential in biomedicine for biomarker discovery, diagnosis, and treatment. However, the immense diversity and complexity of glycan structures and their multiple modes of interactions with proteins pose great challenges for development of analytical tools for delineating structure function relationships and understanding glyco-code. Several tools are being developed for glycan profiling based on chromatography, mass spectrometry, glycan microarrays, and glyco-informatics. Lectins, which have long been used in glyco-immunology, printed on a microarray provide a versatile platform for rapid high throughput analysis of glycoforms of biological samples. Herein, we summarize technological advances in lectin microarrays and critically review their impact on glycomics analysis. Challenges remain in terms of expansion to include nonplant derived lectins, standardization for routine clinical use, development of recombinant lectins, and exploration of plant kingdom for discovery of novel lectins.

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Year:  2010        PMID: 20726799     DOI: 10.1089/omi.2009.0150

Source DB:  PubMed          Journal:  OMICS        ISSN: 1536-2310


  26 in total

Review 1.  Could plant lectins become promising anti-tumour drugs for causing autophagic cell death?

Authors:  Z Liu; Y Luo; T-T Zhou; W-Z Zhang
Journal:  Cell Prolif       Date:  2013-08-24       Impact factor: 6.831

2.  Cell surface lectin array: parameters affecting cell glycan signature.

Authors:  Ludovic Landemarre; Perrine Cancellieri; Eric Duverger
Journal:  Glycoconj J       Date:  2012-08-17       Impact factor: 2.916

3.  On-chip lectin microarray for glycoprofiling of different gastritis types and gastric cancer.

Authors:  Bibhas Roy; Gautam Chattopadhyay; Debasish Mishra; Tamal Das; Suman Chakraborty; Tapas K Maiti
Journal:  Biomicrofluidics       Date:  2014-06-06       Impact factor: 2.800

4.  LC-MS/MS analysis of permethylated N-glycans facilitating isomeric characterization.

Authors:  Shiyue Zhou; Xue Dong; Lucas Veillon; Yifan Huang; Yehia Mechref
Journal:  Anal Bioanal Chem       Date:  2016-10-28       Impact factor: 4.142

5.  Cross validation of liquid chromatography-mass spectrometry and lectin array for monitoring glycosylation in fed-batch glycoprotein production.

Authors:  Catherine A Hayes; Roisin Doohan; David Kirkley; Kirk Leister; Brendan Harhen; Angela V Savage; Niclas G Karlsson
Journal:  Mol Biotechnol       Date:  2012-07       Impact factor: 2.695

6.  Identification of a conserved glycan signature for microvesicles.

Authors:  Bianca S Batista; William S Eng; Kanoelani T Pilobello; Karen D Hendricks-Muñoz; Lara K Mahal
Journal:  J Proteome Res       Date:  2011-09-23       Impact factor: 4.466

7.  Glycomics hits the big time.

Authors:  Gerald W Hart; Ronald J Copeland
Journal:  Cell       Date:  2010-11-24       Impact factor: 41.582

8.  Three-Dimensionally Functionalized Reverse Phase Glycoprotein Array for Cancer Biomarker Discovery and Validation.

Authors:  Li Pan; Hillary Andaluz Aguilar; Linna Wang; Anton Iliuk; W Andy Tao
Journal:  J Am Chem Soc       Date:  2016-11-17       Impact factor: 15.419

Review 9.  Harnessing glycomics technologies: integrating structure with function for glycan characterization.

Authors:  Luke N Robinson; Charlermchai Artpradit; Rahul Raman; Zachary H Shriver; Mathuros Ruchirawat; Ram Sasisekharan
Journal:  Electrophoresis       Date:  2012-03       Impact factor: 3.535

10.  A Method for In-Depth Structural Annotation of Human Serum Glycans That Yields Biological Variations.

Authors:  Ting Song; Danielle Aldredge; Carlito B Lebrilla
Journal:  Anal Chem       Date:  2015-07-14       Impact factor: 6.986

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