Literature DB >> 20726594

A high-throughput O-glycopeptide discovery platform for seromic profiling.

Ola Blixt1, Emiliano Cló, Aaron S Nudelman, Kasper Kildegaard Sørensen, Thomas Clausen, Hans H Wandall, Philip O Livingston, Henrik Clausen, Knud J Jensen.   

Abstract

Biomarker microarrays are becoming valuable tools for serological screening of disease-associated autoantibodies. Post-translational modifications (PTMs) such as glycosylation extend the range of protein function, and a variety of glycosylated proteins are known to be altered in disease progression. Here, we have developed a synthetic screening microarray platform for facile display of O-glycosylated peptides (O-PTMs). By introduction of a capping step during chemical solid-phase glycopeptide synthesis, selective enrichment of N-terminal glycopeptide end products was achieved on an amine-reactive hydrogel-coated microarray glass surface, allowing high-throughput display of large numbers of glycopeptides. Utilizing a repertoire of recombinant glycosyltransferases enabled further diversification of the array libraries in situ and display of a new level of potential biomarker candidates for serological screening. As proof-of-concept, we have demonstrated that MUC1 glycopeptides could be assembled and used to detect autoantibodies in vaccine-induced disease-free breast cancer patients and in patients with confirmed disease at time of diagnosis.

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Year:  2010        PMID: 20726594      PMCID: PMC3001163          DOI: 10.1021/pr1005229

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  49 in total

1.  SPOT synthesis of peptide arrays on self-assembled monolayers and their evaluation as enzyme substrates.

Authors:  Nicolas Laurent; Rose Haddoub; Josef Voglmeir; Stephen C C Wong; Simon J Gaskell; Sabine L Flitsch
Journal:  Chembiochem       Date:  2008-11-03       Impact factor: 3.164

Review 2.  Peptide microarrays: next generation biochips for detection, diagnostics and high-throughput screening.

Authors:  Mahesh Uttamchandani; Shao Q Yao
Journal:  Curr Pharm Des       Date:  2008       Impact factor: 3.116

Review 3.  A systematic review of humoral immune responses against tumor antigens.

Authors:  Miriam Reuschenbach; Magnus von Knebel Doeberitz; Nicolas Wentzensen
Journal:  Cancer Immunol Immunother       Date:  2009-06-28       Impact factor: 6.968

4.  Functional conservation of subfamilies of putative UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferases in Drosophila, Caenorhabditis elegans, and mammals. One subfamily composed of l(2)35Aa is essential in Drosophila.

Authors:  Tilo Schwientek; Eric P Bennett; Carlos Flores; John Thacker; Martin Hollmann; Celso A Reis; Jane Behrens; Ulla Mandel; Birgit Keck; Mireille A Schäfer; Kim Haselmann; Roman Zubarev; Peter Roepstorff; Joy M Burchell; Joyce Taylor-Papadimitriou; Michael A Hollingsworth; Henrik Clausen
Journal:  J Biol Chem       Date:  2002-03-29       Impact factor: 5.157

5.  GlycoPEGylation of recombinant therapeutic proteins produced in Escherichia coli.

Authors:  Shawn DeFrees; Zhi-Guang Wang; Ruye Xing; Arthur E Scott; Jin Wang; David Zopf; Dominique L Gouty; Eric R Sjoberg; Krishnasamy Panneerselvam; Els C M Brinkman-Van der Linden; Robert J Bayer; Mads A Tarp; Henrik Clausen
Journal:  Glycobiology       Date:  2006-05-22       Impact factor: 4.313

6.  Cloning and characterization of a close homologue of human UDP-N-acetyl-alpha-D-galactosamine:Polypeptide N-acetylgalactosaminyltransferase-T3, designated GalNAc-T6. Evidence for genetic but not functional redundancy.

Authors:  E P Bennett; H Hassan; U Mandel; M A Hollingsworth; N Akisawa; Y Ikematsu; G Merkx; A G van Kessel; S Olofsson; H Clausen
Journal:  J Biol Chem       Date:  1999-09-03       Impact factor: 5.157

7.  Development and characterization of an antibody directed to an alpha-N-acetyl-D-galactosamine glycosylated MUC2 peptide.

Authors:  C A Reis; T Sørensen; U Mandel; L David; E Mirgorodskaya; P Roepstorff; J Kihlberg; J E Hansen; H Clausen
Journal:  Glycoconj J       Date:  1998-01       Impact factor: 2.916

8.  Cloning of a human UDP-N-acetyl-alpha-D-Galactosamine:polypeptide N-acetylgalactosaminyltransferase that complements other GalNAc-transferases in complete O-glycosylation of the MUC1 tandem repeat.

Authors:  E P Bennett; H Hassan; U Mandel; E Mirgorodskaya; P Roepstorff; J Burchell; J Taylor-Papadimitriou; M A Hollingsworth; G Merkx; A G van Kessel; H Eiberg; R Steffensen; H Clausen
Journal:  J Biol Chem       Date:  1998-11-13       Impact factor: 5.157

Review 9.  O-linked oligosaccharides of the IgA1 hinge region: roles of its aberrant structure in the occurrence and/or progression of IgA nephropathy.

Authors:  Yoshiyuki Hiki
Journal:  Clin Exp Nephrol       Date:  2009-04-15       Impact factor: 2.801

10.  Preparation and characterization of monoclonal antibodies directed to the tumor-associated O-linked sialosyl-2----6 alpha-N-acetylgalactosaminyl (sialosyl-Tn) epitope.

Authors:  T Kjeldsen; H Clausen; S Hirohashi; T Ogawa; H Iijima; S Hakomori
Journal:  Cancer Res       Date:  1988-04-15       Impact factor: 12.701

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  31 in total

1.  Analysis of Tn antigenicity with a panel of new IgM and IgG1 monoclonal antibodies raised against leukemic cells.

Authors:  Ola Blixt; Olga I Lavrova; Dmitriy V Mazurov; Emiliano Cló; Stjepan K Kracun; Nicolai V Bovin; Alexander V Filatov
Journal:  Glycobiology       Date:  2011-12-05       Impact factor: 4.313

Review 2.  Deciphering enzyme function using peptide arrays.

Authors:  Alexandra Thiele; Gabriele I Stangl; Mike Schutkowski
Journal:  Mol Biotechnol       Date:  2011-11       Impact factor: 2.695

Review 3.  The role of proteomics in the age of immunotherapies.

Authors:  Sarah A Hayes; Stephen Clarke; Nick Pavlakis; Viive M Howell
Journal:  Mamm Genome       Date:  2018-07-25       Impact factor: 2.957

4.  Deciphering structural elements of mucin glycoprotein recognition.

Authors:  Andrew Borgert; Jamie Heimburg-Molinaro; Xuezheng Song; Yi Lasanajak; Tongzhong Ju; Mian Liu; Pamela Thompson; Govind Ragupathi; George Barany; David F Smith; Richard D Cummings; David Live
Journal:  ACS Chem Biol       Date:  2012-04-09       Impact factor: 5.100

Review 5.  Therapeutic cancer vaccines and translating vaccinomics science to the global health clinic: emerging applications toward proof of concept.

Authors:  Megan M O'Meara; Mary L Disis
Journal:  OMICS       Date:  2011-07-06

Review 6.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

7.  Diverse IgG serum response to novel glycopeptide epitopes detected within immunodominant stretches of Epstein-Barr virus glycoprotein 350/220: diagnostic potential of O-glycopeptide microarrays.

Authors:  Isotta D'Arrigo; Emiliano Cló; Tomas Bergström; Sigvard Olofsson; Ola Blixt
Journal:  Glycoconj J       Date:  2013-01-08       Impact factor: 2.916

8.  Plasma Autoantibodies Associated with Basal-like Breast Cancers.

Authors:  Jie Wang; Jonine D Figueroa; Garrick Wallstrom; Kristi Barker; Jin G Park; Gokhan Demirkan; Jolanta Lissowska; Karen S Anderson; Ji Qiu; Joshua LaBaer
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2015-06-12       Impact factor: 4.254

9.  Random glycopeptide bead libraries for seromic biomarker discovery.

Authors:  Stjepan K Kracun; Emiliano Cló; Henrik Clausen; Steven B Levery; Knud J Jensen; Ola Blixt
Journal:  J Proteome Res       Date:  2010-11-02       Impact factor: 4.466

10.  A Contra Capture Protein Array Platform for Studying Post-translationally Modified (PTM) Auto-antigenomes.

Authors:  Kailash Karthikeyan; Kristi Barker; Yanyang Tang; Peter Kahn; Peter Wiktor; Al Brunner; Vinicius Knabben; Bharath Takulapalli; Jane Buckner; Gerald Nepom; Joshua LaBaer; Ji Qiu
Journal:  Mol Cell Proteomics       Date:  2016-05-02       Impact factor: 5.911

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