Literature DB >> 20723051

Considering spatial and temporal scale in landscape-genetic studies of gene flow.

Corey Devin Anderson1, Bryan K Epperson, Marie-Josée Fortin, Rolf Holderegger, Patrick M A James, Michael S Rosenberg, Kim T Scribner, Stephen Spear.   

Abstract

Landscape features exist at multiple spatial and temporal scales, and these naturally affect spatial genetic structure and our ability to make inferences about gene flow. This article discusses how decisions about sampling of genotypes (including choices about analytical methods and genetic markers) should be driven by the scale of spatial genetic structure, the time frame that landscape features have existed in their current state, and all aspects of a species' life history. Researchers should use caution when making inferences about gene flow, especially when the spatial extent of the study area is limited. The scale of sampling of the landscape introduces different features that may affect gene flow. Sampling grain should be smaller than the average home-range size or dispersal distance of the study organism and, for raster data, existing research suggests that simplifying the thematic resolution into discrete classes may result in low power to detect effects on gene flow. Therefore, the methods used to characterize the landscape between sampling sites may be a primary determinant for the spatial scale at which analytical results are applicable, and the use of only one sampling scale for a particular statistical method may lead researchers to overlook important factors affecting gene flow. The particular analytical technique used to correlate landscape data and genetic data may also influence results; common landscape-genetic methods may not be suitable for all study systems, particularly when the rate of landscape change is faster than can be resolved by common molecular markers.

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Year:  2010        PMID: 20723051     DOI: 10.1111/j.1365-294X.2010.04757.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  65 in total

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2.  Expert-based versus habitat-suitability models to develop resistance surfaces in landscape genetics.

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3.  Temporally dynamic habitat suitability predicts genetic relatedness among caribou.

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4.  Landscape models for nuclear genetic diversity and genetic structure in white-footed mice (Peromyscus leucopus).

Authors:  Z S Taylor; S M G Hoffman
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Review 7.  Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions.

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8.  Genetic Structure across Broad Spatial and Temporal Scales: Rocky Mountain Tailed Frogs (Ascaphus montanus; Anura: Ascaphidae) in the Inland Temperate Rainforest.

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9.  Organic acid metabolites involved in local adaptation to altitudinal gradient in Agriophyllum squarrosum, a desert medicinal plant.

Authors:  Shanshan Zhou; Jian Yang; Chaoju Qian; Xiaoyue Yin; Xia Yan; Xingke Fan; Tingzhou Fang; Yuan Gao; Yuxiao Chang; Xiao-Fei Ma
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10.  Going with the flow: analysis of population structure reveals high gene flow shaping invasion pattern and inducing range expansion of Mikania micrantha in Asia.

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