Literature DB >> 20722404

Structure and spectromagnetic properties of the superoxide radical adduct of DMPO in water: elucidation by theoretical investigations.

Céline Houriez1, Nicolas Ferré, Didier Siri, Paul Tordo, Michel Masella.   

Abstract

In the field of spin trapping chemistry, the design of more efficient radical traps can be assisted by the development of theoretical methods able to give a quantitative evaluation of the electron paramagnetic resonance (EPR) spectrum features of the spin-adduct radical, even before initiating the experimental work. The superoxide radical adduct of the 5,5-dimethyl-1-pyrroline-N-oxide nitrone (DMPO-OOH) has been reported in a huge number of papers devoted to the study of the oxidative stress. Here, we present for the first time the theoretical study of DMPO-OOH in an explicit water solution, based on the combined QM/MM//MD protocol we recently proposed, featuring a full coupling between the solute and all the explicit water molecules. Our results show that the DMPO-OOH EPR spectrum, whose interpretation is still debated, can be explained in the light of two sites in chemical exchange, in agreement with the most recent experimental data. Moreover, we demonstrate that each site consists of an equilibrium between the two main 5-membered ring conformations of DMPO-OOH. We provide also an analysis of the solvent contribution to the hyperfine coupling constants (hcc's) as well as an exhaustive study of the possible relationship between the hcc's and the main structural characteristics of DMPO-OOH. Our QM/MM//MD protocol appears thus to be an accurate theoretical tool allowing the investigation of the magnetic properties of large nitroxide spin adducts in complex environments.

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Year:  2010        PMID: 20722404     DOI: 10.1021/jp1033307

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  3 in total

1.  Mitochondria-targeted spin traps: synthesis, superoxide spin trapping, and mitochondrial uptake.

Authors:  Micael Hardy; Florent Poulhés; Egon Rizzato; Antal Rockenbauer; Karol Banaszak; Hakim Karoui; Marcos Lopez; Jacek Zielonka; Jeannette Vasquez-Vivar; Savitha Sethumadhavan; Balaraman Kalyanaraman; Paul Tordo; Olivier Ouari
Journal:  Chem Res Toxicol       Date:  2014-06-13       Impact factor: 3.739

2.  Extension of the AMBER Force Field for Nitroxide Radicals and Combined QM/MM/PCM Approach to the Accurate Determination of EPR Parameters of DMPO-H in Solution.

Authors:  Laura Hermosilla; Giacomo Prampolini; Paloma Calle; José Manuel García de la Vega; Giuseppe Brancato; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2013-07-15       Impact factor: 6.006

3.  One-Step Selective Hydroxylation of Benzene to Phenol with Hydrogen Peroxide Catalysed by Copper Complexes Incorporated into Mesoporous Silica-Alumina.

Authors:  Mihoko Yamada; Kenneth D Karlin; Shunichi Fukuzumi
Journal:  Chem Sci       Date:  2016-01-05       Impact factor: 9.825

  3 in total

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