Literature DB >> 20717561

RNA interference: a chemist's perspective.

James W Gaynor1, Barry J Campbell, Richard Cosstick.   

Abstract

Since the first unequivocal description of RNA interference (RNAi) in 1998, it has remained one of the hottest topics under investigation, culminating in the award of a Nobel Prize to its discoverers in 2006. Excitement over this technique derives from the ease with which it can be used to switch-off a specific gene in almost any organism, thereby allowing the role of that gene to be identified. More importantly, it offers the potential to treat certain diseases by switching-off the causative genes. Key to the RNAi pathway are the small-interfering RNAs (siRNAs), which at 21-23 nucleotides in length are very amenable to analogue development by chemists. However in comparison to the use of oligonucleotides as antisense agents, an area where many chemists first developed an interest in nucleic acids, the RNAi pathway is exceedingly complex. The literature is also complicated by the fact that the phenomenon has been studied in a wide range of organisms. In this tutorial review we have presented the subject from a more chemical perspective, incorporating a glossary to give a clear explanation of the specialist terms. However, the coverage of the biology remains sufficiently detailed to give the reader the necessary insight that we believe will be essential for the successful design of chemically modified siRNA.

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Year:  2010        PMID: 20717561     DOI: 10.1039/b920362c

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  18 in total

Review 1.  RNAi screening: new approaches, understandings, and organisms.

Authors:  Stephanie E Mohr; Norbert Perrimon
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-09-22       Impact factor: 9.957

Review 2.  Strategies, design, and chemistry in siRNA delivery systems.

Authors:  Yizhou Dong; Daniel J Siegwart; Daniel G Anderson
Journal:  Adv Drug Deliv Rev       Date:  2019-05-15       Impact factor: 15.470

3.  Synthesis, properties, and applications of oligonucleotides containing an RNA dinucleotide phosphorothiolate linkage.

Authors:  Nan-Sheng Li; John K Frederiksen; Joseph A Piccirilli
Journal:  Acc Chem Res       Date:  2011-09-01       Impact factor: 22.384

4.  Guanidinium-rich, glycerol-derived oligocarbonates: a new class of cell-penetrating molecular transporters that complex, deliver, and release siRNA.

Authors:  Paul A Wender; Melanie A Huttner; Daryl Staveness; Jessica R Vargas; Adele F Xu
Journal:  Mol Pharm       Date:  2015-01-27       Impact factor: 4.939

5.  Short interfering RNA guide strand modifiers from computational screening.

Authors:  Kazumitsu Onizuka; Jason G Harrison; Alexi A Ball-Jones; José M Ibarra-Soza; Yuxuan Zheng; Diana Ly; Walter Lam; Stephanie Mac; Dean J Tantillo; Peter A Beal
Journal:  J Am Chem Soc       Date:  2013-11-05       Impact factor: 15.419

6.  8-Oxoguanosine switches modulate the activity of alkylated siRNAs by controlling steric effects in the major versus minor grooves.

Authors:  Arunkumar Kannan; Erik Fostvedt; Peter A Beal; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2011-03-31       Impact factor: 15.419

7.  Two symmetric arginine residues play distinct roles in Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.

Authors:  Jinping Lei; Gang Sheng; Peter Pak-Hang Cheung; Shenglong Wang; Yu Li; Xin Gao; Yingkai Zhang; Yanli Wang; Xuhui Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-27       Impact factor: 11.205

8.  Quantitative silencing of EGFP reporter gene by self-assembled siRNA lipoplexes of LinOS and cholesterol.

Authors:  Abdelkader A Metwally; Ian S Blagbrough; Judith M Mantell
Journal:  Mol Pharm       Date:  2012-10-25       Impact factor: 4.939

9.  Self-Assembled Lipoplexes of Short Interfering RNA (siRNA) Using Spermine-Based Fatty Acid Amide Guanidines: Effect on Gene Silencing Efficiency.

Authors:  Abdelkader A Metwally; Ian S Blagbrough
Journal:  Pharmaceutics       Date:  2011-07-13       Impact factor: 6.321

10.  5'-deoxy-5'-hydrazinylguanosine as an initiator of T7 Rna polymerase-catalyzed transcriptions for the preparation of labeling-ready RNAs.

Authors:  Mark Skipsey; Gordon Hack; Thomas A Hooper; Mark C Shankey; Louis P Conway; Martin Schröder; David R W Hodgson
Journal:  Nucleosides Nucleotides Nucleic Acids       Date:  2013       Impact factor: 1.381

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