Literature DB >> 20716961

Epigenetic regulation of the INK4b-ARF-INK4a locus: in sickness and in health.

Nikolay Popov1, Jesús Gil.   

Abstract

The INK4b-ARF-INK4a locus encodes for two cyclin-dependent kinase inhibitors, p15(INK4b) and p16(INK4a) and a regulator of the p53 pathway, ARF. In addition ANRIL, a non-coding RNA, is also transcribed from the locus. ARF, p15(INK4b) and p16(INK4a) are well-established tumor suppressors which function is frequently disabled in human cancers. Recent studies showed that single nucleotide polymorphisms mapping in the vicinity of ANRIL are linked to a wide spectrum of conditions, including cardiovascular disease, ischemic stroke, type 2 diabetes, frailty and Alzheimer's disease. The INK4b-ARF-INK4a locus is regulated by Polycomb repressive complexes (PRCs), and its expression can be invoked by activating signals. Other epigenetic modifiers such as the histone demethylases JMJD3 and JHDM1B, the SWI/SNF chromatin remodeling complex and DNA methyltransferases regulate the locus interplaying with PRCs. In view of the intimate involvement of the INK4b-ARF-INK4a locus on disease, to understand its regulation is the first step for manipulate it to therapeutic benefit.

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Year:  2010        PMID: 20716961      PMCID: PMC3052884          DOI: 10.4161/epi.5.8.12996

Source DB:  PubMed          Journal:  Epigenetics        ISSN: 1559-2294            Impact factor:   4.528


  71 in total

1.  Role of histone H3 lysine 27 methylation in Polycomb-group silencing.

Authors:  Ru Cao; Liangjun Wang; Hengbin Wang; Li Xia; Hediye Erdjument-Bromage; Paul Tempst; Richard S Jones; Yi Zhang
Journal:  Science       Date:  2002-09-26       Impact factor: 47.728

2.  Epigenetic stem cell signature in cancer.

Authors:  Martin Widschwendter; Heidi Fiegl; Daniel Egle; Elisabeth Mueller-Holzner; Gilbert Spizzo; Christian Marth; Daniel J Weisenberger; Mihaela Campan; Joanne Young; Ian Jacobs; Peter W Laird
Journal:  Nat Genet       Date:  2006-12-31       Impact factor: 38.330

3.  Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer.

Authors:  Yeshayahu Schlesinger; Ravid Straussman; Ilana Keshet; Shlomit Farkash; Merav Hecht; Joseph Zimmerman; Eran Eden; Zohar Yakhini; Etti Ben-Shushan; Benjamin E Reubinoff; Yehudit Bergman; Itamar Simon; Howard Cedar
Journal:  Nat Genet       Date:  2006-12-31       Impact factor: 38.330

4.  Tissue-specific p19Arf regulation dictates the response to oncogenic K-ras.

Authors:  Nathan P Young; Tyler Jacks
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

5.  Transcription factor YY1 functions as a PcG protein in vivo.

Authors:  Lakshmi Atchison; Ayesha Ghias; Frank Wilkinson; Nancy Bonini; Michael L Atchison
Journal:  EMBO J       Date:  2003-03-17       Impact factor: 11.598

Review 6.  The regulation of INK4/ARF in cancer and aging.

Authors:  William Y Kim; Norman E Sharpless
Journal:  Cell       Date:  2006-10-20       Impact factor: 41.582

7.  Rnf2 (Ring1b) deficiency causes gastrulation arrest and cell cycle inhibition.

Authors:  Jan Willem Voncken; Bernard A J Roelen; Mieke Roefs; Stijn de Vries; Els Verhoeven; Silvia Marino; Jacqueline Deschamps; Maarten van Lohuizen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-14       Impact factor: 11.205

8.  Chromosome 9p21 SNPs Associated with Multiple Disease Phenotypes Correlate with ANRIL Expression.

Authors:  Michael S Cunnington; Mauro Santibanez Koref; Bongani M Mayosi; John Burn; Bernard Keavney
Journal:  PLoS Genet       Date:  2010-04-08       Impact factor: 5.917

9.  P16INK4a is required for hSNF5 chromatin remodeler-induced cellular senescence in malignant rhabdoid tumor cells.

Authors:  Igor Oruetxebarria; Francesca Venturini; Tuija Kekarainen; Ada Houweling; Lobke M P Zuijderduijn; Adone Mohd-Sarip; Robert G J Vries; Rob C Hoeben; C Peter Verrijzer
Journal:  J Biol Chem       Date:  2003-11-06       Impact factor: 5.157

10.  Polycomb CBX7 has a unifying role in cellular lifespan.

Authors:  Jesús Gil; David Bernard; Dolores Martínez; David Beach
Journal:  Nat Cell Biol       Date:  2003-11-30       Impact factor: 28.213

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  99 in total

Review 1.  Clinical significance of the interaction between non-coding RNAs and the epigenetics machinery: challenges and opportunities in oncology.

Authors:  Beatriz M Maia; Rafael M Rocha; George A Calin
Journal:  Epigenetics       Date:  2013-10-11       Impact factor: 4.528

2.  Chromatin-modifying agents for epigenetic reprogramming and endogenous neural stem cell-mediated repair in stroke.

Authors:  Irfan A Qureshi; Mark F Mehler
Journal:  Transl Stroke Res       Date:  2011-03-01       Impact factor: 6.829

3.  LncRNA ANRIL Expression and ANRIL Gene Polymorphisms Contribute to the Risk of Ischemic Stroke in the Chinese Han Population.

Authors:  Jialei Yang; Lian Gu; Xiaojing Guo; Jiao Huang; Zhaoxia Chen; Guifeng Huang; Yiwen Kang; Xiaoting Zhang; Jianxiong Long; Li Su
Journal:  Cell Mol Neurobiol       Date:  2018-06-07       Impact factor: 5.046

4.  Decreased expression of microRNAs targeting type-2 diabetes susceptibility genes in peripheral blood of patients and predisposed individuals.

Authors:  Ioanna Kokkinopoulou; Eirini Maratou; Panayota Mitrou; Eleni Boutati; Diamantis C Sideris; Emmanuel G Fragoulis; Maria-Ioanna Christodoulou
Journal:  Endocrine       Date:  2019-09-26       Impact factor: 3.633

Review 5.  Non-coding RNAs: key regulators of smooth muscle cell fate in vascular disease.

Authors:  Nicholas J Leeper; Lars Maegdefessel
Journal:  Cardiovasc Res       Date:  2018-03-15       Impact factor: 10.787

Review 6.  Long noncoding RNA, polycomb, and the ghosts haunting INK4b-ARF-INK4a expression.

Authors:  Francesca Aguilo; Ming-Ming Zhou; Martin J Walsh
Journal:  Cancer Res       Date:  2011-08-09       Impact factor: 12.701

Review 7.  Long non-coding RNAs as novel biomarkers and therapeutic targets in head and neck cancers.

Authors:  Qing-Qing Yang; Yan-Fei Deng
Journal:  Int J Clin Exp Pathol       Date:  2014-03-15

8.  Tumor suppressor p16INK4A is necessary for survival of cervical carcinoma cell lines.

Authors:  Margaret E McLaughlin-Drubin; Donglim Park; Karl Munger
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-17       Impact factor: 11.205

Review 9.  Transcriptional regulation and its misregulation in disease.

Authors:  Tong Ihn Lee; Richard A Young
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

10.  Regulators of gene expression as biomarkers for prostate cancer.

Authors:  Stacey S Willard; Shahriar Koochekpour
Journal:  Am J Cancer Res       Date:  2012-11-20       Impact factor: 6.166

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