Literature DB >> 20713507

Structural basis for methylarginine-dependent recognition of Aubergine by Tudor.

Haiping Liu1, Ju-Yu S Wang, Ying Huang, Zhizhong Li, Weimin Gong, Ruth Lehmann, Rui-Ming Xu.   

Abstract

Piwi proteins are modified by symmetric dimethylation of arginine (sDMA), and the methylarginine-dependent interaction with Tudor domain proteins is critical for their functions in germline development. Cocrystal structures of an extended Tudor domain (eTud) of Drosophila Tudor with methylated peptides of Aubergine, a Piwi family protein, reveal that sDMA is recognized by an asparagine-gated aromatic cage. Furthermore, the unexpected Tudor-SN/p100 fold of eTud is important for sensing the position of sDMA. The structural information provides mechanistic insights into sDMA-dependent Piwi-Tudor interaction, and the recognition of sDMA by Tudor domains in general.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20713507      PMCID: PMC2932969          DOI: 10.1101/gad.1956010

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  33 in total

1.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

Review 2.  Tudor domains in proteins that interact with RNA.

Authors:  C P Ponting
Journal:  Trends Biochem Sci       Date:  1997-02       Impact factor: 13.807

3.  High-resolution X-ray and NMR structures of the SMN Tudor domain: conformational variation in the binding site for symmetrically dimethylated arginine residues.

Authors:  Remco Sprangers; Matthew R Groves; Irmgard Sinning; Michael Sattler
Journal:  J Mol Biol       Date:  2003-03-21       Impact factor: 5.469

4.  Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A.

Authors:  Ying Huang; Jia Fang; Mark T Bedford; Yi Zhang; Rui-Ming Xu
Journal:  Science       Date:  2006-04-06       Impact factor: 47.728

5.  Functional involvement of Tudor and dPRMT5 in the piRNA processing pathway in Drosophila germlines.

Authors:  Kazumichi M Nishida; Tomoko N Okada; Takeshi Kawamura; Toutai Mituyama; Yoshinori Kawamura; Sachi Inagaki; Haidong Huang; Dahua Chen; Tatsuhiko Kodama; Haruhiko Siomi; Mikiko C Siomi
Journal:  EMBO J       Date:  2009-12-16       Impact factor: 11.598

6.  PHENIX: a comprehensive Python-based system for macromolecular structure solution.

Authors:  Paul D Adams; Pavel V Afonine; Gábor Bunkóczi; Vincent B Chen; Ian W Davis; Nathaniel Echols; Jeffrey J Headd; Li-Wei Hung; Gary J Kapral; Ralf W Grosse-Kunstleve; Airlie J McCoy; Nigel W Moriarty; Robert Oeffner; Randy J Read; David C Richardson; Jane S Richardson; Thomas C Terwilliger; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  Tdrd6 is required for spermiogenesis, chromatoid body architecture, and regulation of miRNA expression.

Authors:  Ana Vasileva; Daniela Tiedau; Adriana Firooznia; Thomas Müller-Reichert; Rolf Jessberger
Journal:  Curr Biol       Date:  2009-04-02       Impact factor: 10.834

8.  Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31.

Authors:  Amy C Groth; Matthew Fish; Roel Nusse; Michele P Calos
Journal:  Genetics       Date:  2004-04       Impact factor: 4.562

9.  Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members.

Authors:  Vasily V Vagin; James Wohlschlegel; Jun Qu; Zophonias Jonsson; Xinhua Huang; Shinichiro Chuma; Angelique Girard; Ravi Sachidanandam; Gregory J Hannon; Alexei A Aravin
Journal:  Genes Dev       Date:  2009-07-07       Impact factor: 11.361

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  71 in total

Review 1.  Male germline control of transposable elements.

Authors:  Jianqiang Bao; Wei Yan
Journal:  Biol Reprod       Date:  2012-05-31       Impact factor: 4.285

2.  Elective affinities: a Tudor-Aubergine tale of germline partnership.

Authors:  Anastassios Vourekas; Yohei Kirino; Zissimos Mourelatos
Journal:  Genes Dev       Date:  2010-09-15       Impact factor: 11.361

3.  PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells.

Authors:  Labib Rouhana; Ana P Vieira; Rachel H Roberts-Galbraith; Phillip A Newmark
Journal:  Development       Date:  2012-02-08       Impact factor: 6.868

4.  Argonaute protein as a linker to command center of physiological processes.

Authors:  Kaifa Wei; Lingjuan Wu; Yanhui Chen; Yina Lin; Yanmei Wang; Xiaoyao Liu; Daoxin Xie
Journal:  Chin J Cancer Res       Date:  2013-08       Impact factor: 5.087

Review 5.  The piRNA Pathway Guards the Germline Genome Against Transposable Elements.

Authors:  Katalin Fejes Tóth; Dubravka Pezic; Evelyn Stuwe; Alexandre Webster
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

Review 6.  New insights and challenges in mismatch repair: getting over the chromatin hurdle.

Authors:  Guo-Min Li
Journal:  DNA Repair (Amst)       Date:  2014-04-24

7.  Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation.

Authors:  Chuanbing Bian; Chao Xu; Jianbin Ruan; Kenneth K Lee; Tara L Burke; Wolfram Tempel; Dalia Barsyte; Jing Li; Minhao Wu; Bo O Zhou; Brian E Fleharty; Ariel Paulson; Abdellah Allali-Hassani; Jin-Qiu Zhou; Georges Mer; Patrick A Grant; Jerry L Workman; Jianye Zang; Jinrong Min
Journal:  EMBO J       Date:  2011-06-17       Impact factor: 11.598

Review 8.  Readers of histone methylarginine marks.

Authors:  Sitaram Gayatri; Mark T Bedford
Journal:  Biochim Biophys Acta       Date:  2014-02-28

9.  Sequence-Independent Self-Assembly of Germ Granule mRNAs into Homotypic Clusters.

Authors:  Tatjana Trcek; Tyler E Douglas; Markus Grosch; Yandong Yin; Whitby V I Eagle; Elizabeth R Gavis; Hari Shroff; Eli Rothenberg; Ruth Lehmann
Journal:  Mol Cell       Date:  2020-05-27       Impact factor: 17.970

10.  BRK1, a Bub1-related kinase, is essential for generating proper tension between homologous kinetochores at metaphase I of rice meiosis.

Authors:  Mo Wang; Ding Tang; Qiong Luo; Yi Jin; Yi Shen; Kejian Wang; Zhukuan Cheng
Journal:  Plant Cell       Date:  2012-12-14       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.