Literature DB >> 20713449

Replication factor C recruits DNA polymerase delta to sites of nucleotide excision repair but is not required for PCNA recruitment.

René M Overmeer1, Audrey M Gourdin, Ambra Giglia-Mari, Hanneke Kool, Adriaan B Houtsmuller, Gregg Siegal, Maria I Fousteri, Leon H F Mullenders, Wim Vermeulen.   

Abstract

Nucleotide excision repair (NER) operates through coordinated assembly of repair factors into pre- and postincision complexes. The postincision step of NER includes gap-filling DNA synthesis and ligation. However, the exact composition of this NER-associated DNA synthesis complex in vivo and the dynamic interactions of the factors involved are not well understood. Using immunofluorescence, chromatin immunoprecipitation, and live-cell protein dynamic studies, we show that replication factor C (RFC) is implicated in postincision NER in mammalian cells. Small interfering RNA-mediated knockdown of RFC impairs upstream removal of UV lesions and abrogates the downstream recruitment of DNA polymerase delta. Unexpectedly, RFC appears dispensable for PCNA recruitment yet is required for the subsequent recruitment of DNA polymerases to PCNA, indicating that RFC is essential to stably load the polymerase clamp to start DNA repair synthesis at 3' termini. The kinetic studies are consistent with a model in which RFC exchanges dynamically at sites of repair. However, its persistent localization at stalled NER complexes suggests that RFC remains targeted to the repair complex even after loading of PCNA. We speculate that RFC associates with the downstream 5' phosphate after loading; such interaction would prevent possible signaling events initiated by the RFC-like Rad17 and may assist in unloading of PCNA.

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Year:  2010        PMID: 20713449      PMCID: PMC2950542          DOI: 10.1128/MCB.00285-10

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  47 in total

1.  Local UV-induced DNA damage in cell nuclei results in local transcription inhibition.

Authors:  M J Moné; M Volker; O Nikaido; L H Mullenders; A A van Zeeland; P J Verschure; E M Manders; R van Driel
Journal:  EMBO Rep       Date:  2001-11       Impact factor: 8.807

2.  Loading of the human 9-1-1 checkpoint complex onto DNA by the checkpoint clamp loader hRad17-replication factor C complex in vitro.

Authors:  Vladimir P Bermudez; Laura A Lindsey-Boltz; Anthony J Cesare; Yoshimasa Maniwa; Jack D Griffith; Jerard Hurwitz; Aziz Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-10       Impact factor: 11.205

Review 3.  Dial 9-1-1 for DNA damage: the Rad9-Hus1-Rad1 (9-1-1) clamp complex.

Authors:  Edgardo R Parrilla-Castellar; Sonnet J H Arlander; Larry Karnitz
Journal:  DNA Repair (Amst)       Date:  2004 Aug-Sep

Review 4.  Genome stability: a new member of the RFC family.

Authors:  Jiyoung Kim; Stuart A MacNeill
Journal:  Curr Biol       Date:  2003-11-11       Impact factor: 10.834

5.  Single-strand breaks in DNA during repair of UV-induced damage in normal human and xeroderma pigmentosum cells as determined by alkaline DNA unwinding and hydroxylapatite chromatography: effects of hydroxyurea, 5-fluorodeoxyuridine and 1-beta-D-arabinofuranosylcytosine on the kinetics of repair.

Authors:  K Erixon; G Ahnström
Journal:  Mutat Res       Date:  1979-02       Impact factor: 2.433

6.  Local action of the chromatin assembly factor CAF-1 at sites of nucleotide excision repair in vivo.

Authors:  Catherine M Green; Geneviève Almouzni
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

7.  In vivo recruitment of XPC to UV-induced cyclobutane pyrimidine dimers by the DDB2 gene product.

Authors:  Maureen E Fitch; Satoshi Nakajima; Akira Yasui; James M Ford
Journal:  J Biol Chem       Date:  2003-08-27       Impact factor: 5.157

8.  The reconstituted human Chl12-RFC complex functions as a second PCNA loader.

Authors:  Yasushi Shiomi; Ayako Shinozaki; Katsunori Sugimoto; Jiro Usukura; Chikashi Obuse; Toshiki Tsurimoto
Journal:  Genes Cells       Date:  2004-04       Impact factor: 1.891

9.  DNA damage stabilizes interaction of CSB with the transcription elongation machinery.

Authors:  Vincent van den Boom; Elisabetta Citterio; Deborah Hoogstraten; Angelika Zotter; Jean-Marc Egly; Wiggert A van Cappellen; Jan H J Hoeijmakers; Adriaan B Houtsmuller; Wim Vermeulen
Journal:  J Cell Biol       Date:  2004-06-28       Impact factor: 10.539

10.  Biochemical characterization of DNA damage checkpoint complexes: clamp loader and clamp complexes with specificity for 5' recessed DNA.

Authors:  Viola Ellison; Bruce Stillman
Journal:  PLoS Biol       Date:  2003-11-17       Impact factor: 8.029

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  31 in total

1.  Binding kinetics of human ISWI chromatin-remodelers to DNA repair sites elucidate their target location mechanism.

Authors:  Fabian Erdel; Karsten Rippe
Journal:  Nucleus       Date:  2011 Mar-Apr       Impact factor: 4.197

2.  Identification of RNF8 as a ubiquitin ligase involved in targeting the p12 subunit of DNA polymerase δ for degradation in response to DNA damage.

Authors:  Sufang Zhang; Yajing Zhou; Ali Sarkeshik; John R Yates; Timothy M Thomson; Zhongtao Zhang; Ernest Y C Lee; Marietta Y W T Lee
Journal:  J Biol Chem       Date:  2012-12-11       Impact factor: 5.157

3.  Spatiotemporal recruitment of human DNA polymerase delta to sites of UV damage.

Authors:  Jennifer Chea; Sufang Zhang; Hong Zhao; Zhongtao Zhang; Ernest Y C Lee; Zbigniew Darzynkiewicz; Marietta Y W T Lee
Journal:  Cell Cycle       Date:  2012-08-01       Impact factor: 4.534

Review 4.  PostExcision Events in Human Nucleotide Excision Repair.

Authors:  Michael G Kemp; Jinchuan Hu
Journal:  Photochem Photobiol       Date:  2016-10-27       Impact factor: 3.421

5.  Polymerase δ promotes chromosomal rearrangements and imprecise double-strand break repair.

Authors:  Jacob V Layer; Lydie Debaize; Alexandria Van Scoyk; Nealia C House; Alexander J Brown; Yunpeng Liu; Kristen E Stevenson; Michael Hemann; Steven A Roberts; Brendan D Price; David M Weinstock; Tovah A Day
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-19       Impact factor: 11.205

6.  The nucleosome binding protein HMGN1 interacts with PCNA and facilitates its binding to chromatin.

Authors:  Yuri V Postnikov; Toshihiro Kurahashi; Ming Zhou; Michael Bustin
Journal:  Mol Cell Biol       Date:  2012-03-05       Impact factor: 4.272

7.  PDIP38 is translocated to the spliceosomes/nuclear speckles in response to UV-induced DNA damage and is required for UV-induced alternative splicing of MDM2.

Authors:  Agnes Wong; Sufang Zhang; Dana Mordue; Joseph M Wu; Zhongtao Zhang; Zbigniew Darzynkiewicz; Ernest Y C Lee; Marietta Y W T Lee
Journal:  Cell Cycle       Date:  2013-09-03       Impact factor: 4.534

8.  DNA repair synthesis and ligation affect the processing of excised oligonucleotides generated by human nucleotide excision repair.

Authors:  Michael G Kemp; Shobhan Gaddameedhi; Jun-Hyuk Choi; Jinchuan Hu; Aziz Sancar
Journal:  J Biol Chem       Date:  2014-08-08       Impact factor: 5.157

9.  Conotruncal heart defects and common variants in maternal and fetal genes in folate, homocysteine, and transsulfuration pathways.

Authors:  Charlotte A Hobbs; Mario A Cleves; Stewart L Macleod; Stephen W Erickson; Xinyu Tang; Jingyun Li; Ming Li; Todd Nick; Sadia Malik
Journal:  Birth Defects Res A Clin Mol Teratol       Date:  2014-02-18

10.  ShRNA-based POLD2 expression knockdown sensitizes glioblastoma to DNA-Damaging therapeutics.

Authors:  Qingfu Xu; Chengchen Hu; Yan Zhu; Kimberly Wang; Bachuchu Lal; Lichao Li; Junhai Tang; Shuang Wei; Guohao Huang; Shuli Xia; Shengqing Lv; John Laterra; Yugang Jiang; Yunqing Li
Journal:  Cancer Lett       Date:  2020-01-16       Impact factor: 8.679

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