Literature DB >> 20712890

Analysis of genetic copy number changes in cervical disease progression.

Frank A Policht1, Minghao Song, Svetlana Sitailo, Anna O'Hare, Raheela Ashfaq, Carolyn Y Muller, Larry E Morrison, Walter King, Irina A Sokolova.   

Abstract

BACKGROUND: Cervical dysplasia and tumorigenesis have been linked with numerous chromosomal aberrations. The goal of this study was to evaluate 35 genomic regions associated with cervical disease and to select those which were found to have the highest frequency of aberration for use as probes in fluorescent in-situ hybridization.
METHODS: The frequency of gains and losses using fluorescence in-situ hybridization were assessed in these 35 regions on 30 paraffin-embedded cervical biopsy specimens. Based on this assessment, 6 candidate fluorescently labeled probes (8q24, Xp22, 20q13, 3p14, 3q26, CEP15) were selected for additional testing on a set of 106 cervical biopsy specimens diagnosed as Normal, CIN1, CIN2, CIN3, and SCC. The data were analyzed on the basis of signal mean, % change of signal mean between histological categories, and % positivity.
RESULTS: The study revealed that the chromosomal regions with the highest frequency of copy number gains and highest combined sensitivity and specificity in high-grade cervical disease were 8q24 and 3q26. The cytological application of these two probes was then evaluated on 118 ThinPrep samples diagnosed as Normal, ASCUS, LSIL, HSIL and Cancer to determine utility as a tool for less invasive screening. Using gains of either 8q24 or 3q26 as a positivity criterion yielded specificity (Normal +LSIL+ASCUS) of 81.0% and sensitivity (HSIL+Cancer) of 92.3% based on a threshold of 4 positive cells.
CONCLUSIONS: The application of a FISH assay comprised of chromosomal probes 8q24 and 3q26 to cervical cytology specimens confirms the positive correlation between increasing dysplasia and copy gains and shows promise as a marker in cervical disease progression.

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Year:  2010        PMID: 20712890      PMCID: PMC2936324          DOI: 10.1186/1471-2407-10-432

Source DB:  PubMed          Journal:  BMC Cancer        ISSN: 1471-2407            Impact factor:   4.430


  35 in total

1.  Gene expression profiles in squamous cell cervical carcinoma using array-based comparative genomic hybridization analysis.

Authors:  Y-W Choi; S M Bae; Y-W Kim; H N Lee; Y W Kim; T C Park; D Y Ro; J C Shin; S J Shin; J-S Seo; W S Ahn
Journal:  Int J Gynecol Cancer       Date:  2007 May-Jun       Impact factor: 3.437

Review 2.  Functional significance of Aurora kinase A in centrosome amplification and genomic instability.

Authors:  Subrata Sen; Hiroshi Katayama; Kaori Sasai
Journal:  Adv Exp Med Biol       Date:  2008       Impact factor: 2.622

3.  Overview of the European and North American studies on HPV testing in primary cervical cancer screening.

Authors:  Jack Cuzick; Christine Clavel; Karl-Ulrich Petry; Chris J L M Meijer; Heike Hoyer; Samuel Ratnam; Anne Szarewski; Philippe Birembaut; Shalini Kulasingam; Peter Sasieni; Thomas Iftner
Journal:  Int J Cancer       Date:  2006-09-01       Impact factor: 7.396

Review 4.  The Aurora kinase family in cell division and cancer.

Authors:  Gerben Vader; Susanne M A Lens
Journal:  Biochim Biophys Acta       Date:  2008-07-23

Review 5.  Update on aurora kinase inhibitors in gynecologic malignancies.

Authors:  Xia Tao; Hye S Chon; Siqing Fu; John J Kavanagh; Wei Hu
Journal:  Recent Pat Anticancer Drug Discov       Date:  2008-11       Impact factor: 4.169

6.  Clinical significance of hTERC gene amplification detection by FISH in the screening of cervical lesions.

Authors:  Yuan Zhang; Xiaobei Wang; Ling Ma; Zehua Wang; Lihua Hu
Journal:  J Huazhong Univ Sci Technolog Med Sci       Date:  2009-06-10

7.  Gain of 3q26: a genetic marker in low-grade squamous intraepithelial lesions (LSIL) of the uterine cervix.

Authors:  Antti Seppo; G Reza Jalali; Robert Babkowski; Hera Symiakaki; Alexandros Rodolakis; Triantafyllos Tafas; Petros Tsipouras; Michael W Kilpatrick
Journal:  Gynecol Oncol       Date:  2009-04-25       Impact factor: 5.482

8.  Integrated genomic and transcriptional profiling identifies chromosomal loci with altered gene expression in cervical cancer.

Authors:  Saskia M Wilting; Jillian de Wilde; Chris J L M Meijer; Johannes Berkhof; Yajun Yi; Wessel N van Wieringen; Boudewijn J M Braakhuis; Gerrit A Meijer; Bauke Ylstra; Peter J F Snijders; Renske D M Steenbergen
Journal:  Genes Chromosomes Cancer       Date:  2008-10       Impact factor: 5.006

9.  Gain of the 3q26 region in cervicovaginal liquid-based pap preparations is associated with squamous intraepithelial lesions and squamous cell carcinoma.

Authors:  Nancy P Caraway; Abha Khanna; Marilyn Dawlett; Ming Guo; Nina Guo; E Lin; Ruth L Katz
Journal:  Gynecol Oncol       Date:  2008-04-22       Impact factor: 5.482

10.  3q26 (hTERC) gain studied by fluorescence in situ hybridization as a persistence-progression indicator in low-grade squamous intraepithelial lesion cases.

Authors:  Francesc Alameda; Blanca Espinet; Cristina Corzo; Raquel Muñoz; Beatriz Bellosillo; Belén Lloveras; Lara Pijuan; Javier Gimeno; Marta Salido; Francesc Solé; Ramon Carreras; Sergi Serrano
Journal:  Hum Pathol       Date:  2009-06-21       Impact factor: 3.466

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  9 in total

Review 1.  Telomerase and the process of cervical carcinogenesis.

Authors:  M Nachajova; D Brany; D Dvorska
Journal:  Tumour Biol       Date:  2015-08-30

2.  Chromosomal gains measured in cytology samples from women with abnormal cervical cancer screening results.

Authors:  Patricia Luhn; Jane Houldsworth; Lynnette Cahill; Mark Schiffman; Philip E Castle; Rosemary E Zuna; S Terence Dunn; Michael A Gold; Joan Walker; Nicolas Wentzensen
Journal:  Gynecol Oncol       Date:  2013-06-13       Impact factor: 5.482

3.  Genomic amplification patterns of human telomerase RNA gene and C-MYC in liquid-based cytological specimens used for the detection of high-grade cervical intraepithelial neoplasia.

Authors:  Shaomin Chen; Ziyan Yang; Yun Zhang; Yunbo Qiao; Baoxia Cui; Youzhong Zhang; Beihua Kong
Journal:  Diagn Pathol       Date:  2012-04-13       Impact factor: 2.644

4.  c-myc copy number gain is a powerful prognosticator of disease outcome in cervical dysplasia.

Authors:  Kirsten Kübler; Sally Heinenberg; Christian Rudlowski; Mignon-Denise Keyver-Paik; Alina Abramian; Sabine Merkelbach-Bruse; Reinhard Büttner; Walther Kuhn; Hans-Ulrich Schildhaus
Journal:  Oncotarget       Date:  2015-01-20

5.  DNA Copy Number Aberrations, and Human Papillomavirus Status in Penile Carcinoma. Clinico-Pathological Correlations and Potential Driver Genes.

Authors:  Susannah La-Touche; Christophe Lemetre; Maryou Lambros; Elzbieta Stankiewicz; Charlotte K Y Ng; Britta Weigelt; Ramzi Rajab; Brendan Tinwell; Cathy Corbishley; Nick Watkin; Dan Berney; Jorge S Reis-Filho
Journal:  PLoS One       Date:  2016-02-22       Impact factor: 3.240

6.  Folate Repletion after Deficiency Induces Irreversible Genomic and Transcriptional Changes in Human Papillomavirus Type 16 (HPV16)-Immortalized Human Keratinocytes.

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Journal:  Int J Mol Sci       Date:  2019-03-04       Impact factor: 5.923

7.  An Optimization-Driven Analysis Pipeline to Uncover Biomarkers and Signaling Paths: Cervix Cancer.

Authors:  Enery Lorenzo; Katia Camacho-Caceres; Alexander J Ropelewski; Juan Rosas; Michael Ortiz-Mojer; Lynn Perez-Marty; Juan Irizarry; Valerie Gonzalez; Jesús A Rodríguez; Mauricio Cabrera-Rios; Clara Isaza
Journal:  Microarrays (Basel)       Date:  2015-06

8.  Increased expression of RRM2 by human papillomavirus E7 oncoprotein promotes angiogenesis in cervical cancer.

Authors:  N Wang; T Zhan; T Ke; X Huang; D Ke; Q Wang; H Li
Journal:  Br J Cancer       Date:  2014-01-14       Impact factor: 7.640

9.  Modeling the dynamics of chromosomal alteration progression in cervical cancer: A computational model.

Authors:  Augusto Cabrera-Becerril; Cruz Vargas-De-León; Sergio Hernández; Pedro Miramontes; Raúl Peralta
Journal:  PLoS One       Date:  2017-07-19       Impact factor: 3.240

  9 in total

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