| Literature DB >> 20712879 |
Marianne E Sinka1, Yasmin Rubio-Palis, Sylvie Manguin, Anand P Patil, Will H Temperley, Peter W Gething, Thomas Van Boeckel, Caroline W Kabaria, Ralph E Harbach, Simon I Hay.
Abstract
BACKGROUND: An increasing knowledge of the global risk of malaria shows that the nations of the Americas have the lowest levels of Plasmodium falciparum and P. vivax endemicity worldwide, sustained, in part, by substantive integrated vector control. To help maintain and better target these efforts, knowledge of the contemporary distribution of each of the dominant vector species (DVS) of human malaria is needed, alongside a comprehensive understanding of the ecology and behaviour of each species.Entities:
Year: 2010 PMID: 20712879 PMCID: PMC2936890 DOI: 10.1186/1756-3305-3-72
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Defining the dominant Anopheles vector species and species complexes of human malaria in the Americas.
| Anopheline species or species complex | TAG final | EO source | ||||||
|---|---|---|---|---|---|---|---|---|
| 1, 2, 3 | 1, 2, 3 | 1, 2, 3 | 1, 2, 3 | 1 | 1 | 1 | Rubio-Palis (unpub. obs., 2008), Manguin (unpub. obs., 2009), Fernandez (unpub. obs., 2009), Updated by TAG (2009). | |
| 3 | 3 | 1 | 1 | [ | ||||
| 2, 3 | 2, 3 | 2, 3 | 2, 3 | 1 | 1 | 1 | [ | |
| 2, 3 | 2, 3 | 2, 3 | 2, 3 | 1 | 1 | 1 | [ | |
| 1 | 1 | 1 | 1 | 1 | [ | |||
| 2, 3 | 1 | 1 | [ | |||||
| 3 | 3 | 3 | 3 | 1 | 1 | 1 | [ | |
| 1, 2, 3 | 1, 2, 3 | 1, 2, 3 | 1, 2, 3 | 1 | 1 | 1 | [ | |
| 1 | 1 | 1 | 1 | 1 | 1 | 1 | [ |
* denotes that a "species" is now recognized as a species complex. The exclusive (Exc.) column counts those species identified in all four listed reviews. The inclusive (Inc.) column counts those species identified by any of the four reviews and are therefore the candidate dominant vector species (DVS) considered for mapping. The numbers given in each of the review author columns record the Macdonald malaria epidemiology zone [199] in which the species can be found: 1 - North American; 2 - Central American; 3 - South American. The final DVS species listed were defined during two meetings of a Technical Advisory Group (TAG). EO = Expert opinion.
Citation search results for the bionomics survey taken from the MAP database.
| Species | Citations (unfiltered) | Citations (filtered) | Citations with data | |
|---|---|---|---|---|
| 111 | 68 | 24 | [ | |
| 73 | 42 | 15 | [ | |
| 30 | 20 | 10 | [ | |
| 138 | 78 | 36 | [ | |
| 19 | - | 3 | [ | |
| - | - | 6 | [ | |
| 53 | 28 | 10 | [ | |
| 46 | 32 | 20 | [ | |
| 66 | 36 | 16 | [ | |
Filter terms were: behaviour, behavior, larva, biting, resting and habitat. Anopheles albitarsis and An. marajoara libraries were combined prior to data extractions to try and ensure no information was omitted (An. marajoara is a sibling of the An. albitarsis complex). Articles/data specific to An. marajoara were listed in the datasheet separately and those listed under "An. albitarsis" are for all other members of the complex, excluding An. marajoara
Larval site characteristics.
| Species | Source | Light intensity | Salinity | Turbidity | Movement | Vegetation | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Helio-philic | Helio-phobic | High (brackish) | Low (fresh) | Clear | Polluted | Still or stagnant | Flowing | No Veg | |||
| Summary | 3 | 4 | 4 | 1 | 3 | 3 | 12 | ||||
| TAG | ● | ○ | ● | ● | ● | ○ | ● | ||||
| Summary | 1 | 2 | 2 | 1 | 2 | ||||||
| TAG | ● | ● | ● | ○ | ● | ● | |||||
| Summary | 2 | 3 | 2 | 1 | 1 | 2 | 1 | 3 | |||
| TAG | ● | ● | ● | ● | ● | ● | |||||
| Summary | 1 | 6 | 1 | 1 | 2 | 1 | 4 | 4 | 8 | ||
| TAG | ○ | ● | ● | ● | ● | ● | ● | ||||
| Summary | |||||||||||
| TAG | ● | ● | ● | ● | ● | ||||||
| Summary | 2 | 1 | 1 | 1 | |||||||
| TAG | ● | ○ | ● | ● | ● | ● | ● | ||||
| Summary | 3 | 3 | 2 | 2 | 1 | ||||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ||||
| Summary | 2 | 3 | 2 | 2 | 1 | 2 | 1 | 10 | |||
| TAG | ● | ○ | ● | ● | ○ | ● | ○ | ● | |||
| Summary | 2 | 1 | 1 | 2 | 8 | 1 | |||||
| TAG | ● | ● | ● | ● | ● | ||||||
TAG: Rubio-Palis & Manguin (unpub. obs., 2009, 2010), ● = typical, ○ = examples exist. Numbers indicate the number of studies that found larvae under each listed circumstance. Anopheles albitarsis refers to the An. albitarsis complex, which includes An. albitarsis, An. albitarsis sp. B, sp. E and An. deaneorum. Anopheles marajoara is listed separately.
Large larval sites.
| Species | Source | Large natural water collections | Large man-made water collections | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lagoons | Lakes | Marshes | Bogs | Slow flowing rivers | Other | Borrow pits | Rice fields | Fish ponds | Irrigation channels | Other | ||
| Summary | 5 | 1 | 5 | 1 | 1 | 7 | 2 | 1 | 3 | 1 | ||
| TAG | ● | ○ | ● | ○ | ● | |||||||
| Summary | 2 | 1 | 1 | 1 | ||||||||
| TAG | ● | ● | ● | ● | ||||||||
| Summary | 1 | 2 | 4 | 1 | ||||||||
| TAG | ● | ● | ● | ● | ● | |||||||
| Summary | 2 | 2 | 3 | 1 | 1 | 2 | ||||||
| TAG | ● | ● | ● | ● | ● | ○ | ||||||
| Summary | 1 | 5 | ||||||||||
| TAG | ● | |||||||||||
| Summary | 1 | 1 | 1 | |||||||||
| TAG | ● | ● | ● | ● | ● | ● | ○ | |||||
| Summary | 1 | 1 | 1 | 2 | 1 | |||||||
| TAG | ● | ● | ● | ● | ● | ● | ○ | |||||
| Summary | 3 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | ||||
| TAG | ○ | ○ | ||||||||||
| Summary | 4 | 3 | 2 | 1 | 9 | 2 | ||||||
| TAG | ● | ● | ● | ● | ● | |||||||
TAG: Rubio-Palis & Manguin (unpub. obs., 2009, 2010), ● = typical, ○ = examples exist. Numbers indicate the number of studies that found larvae under each listed circumstance. Anopheles albitarsis refers to the An. albitarsis complex, which includes An. albitarsis, An. albitarsis sp. B, sp. E and An. deaneorum. Anopheles marajoara is listed separately.
Adult feeding and resting behaviour.
| Species | Source | Feeding habit | Biting habit | Biting time | Pre-feeding resting habit | Post-feeding resting habit | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Anthro-pophilic | Zoo-philic | Exo-phagic | Endo-phagic | Day | Dusk | Night | Dawn | Exo-philic | Endo-philic | Exo-philic | Endo-philic | ||
| Summary | 2 | 2 | 9 | 2 | 7 | 9 | 0 | 1 | 3 | ||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | |||||
| Summary | 2 | 2 | 4 | 3 | 7 | 3 | 2 | ||||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | ○ | ||||
| Summary | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | ||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | |||||
| Summary | 12 | 9 | 6 | 15 | 23 | 3 | 1 | 2 | |||||
| TAG | ● | ○ | ● | ● | ● | ● | ● | ● | ● | ||||
| Summary | 1 | 1 | |||||||||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | ● | ||||
| Summary | 2 | 2 | 3 | 4 | 1 | 1 | 2 | ||||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | |||||
| Summary | 2 | 4 | 5 | 1 | 3 | 1 | 1 | 2 | |||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | ● | ||||
| Summary | 3 | 2 | 3 | 1 | 1 | 1 | 2 | ||||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ● | |||||
| Summary | 3 | 2 | 1 | 1 | 2 | 2 | |||||||
| TAG | ● | ● | ● | ○ | ● | ● | ● | ● | ● | ||||
TAG: Rubio-Palis & Manguin (unpub. obs., 2009, 2010), ● = typical, ○ = examples exist. Numbers indicate the number of studies that found adults under each listed circumstance. Anopheles albitarsis refers to the An. albitarsis complex, which includes An. albitarsis, An. albitarsis sp. B, sp. E and An. deaneorum. Anopheles marajoara is listed separately.
Number of sites recording species presence per country by area type (points (≤10 km2), wide areas (10-25 km2), small (25-100 km2) and large (>100 km2) polygons).
| Country | Point | Wide-area | Small polygon | Large polygon | |
|---|---|---|---|---|---|
| Argentina | 19 | 2 | - | - | |
| Belize | 228 | 2 | - | 13 | |
| Bolivia | 17 | - | 1 | 2 | |
| Brazil | 304 | 16 | 17 | 136 | |
| Colombia | 67 | 4 | 6 | 9 | |
| Costa Rica | 40 | - | - | 1 | |
| Cuba | 5 | 1 | - | 2 | |
| Dominican Republic | 5 | 1 | 2 | - | |
| Ecuador | 19 | - | - | - | |
| El Salvador | 3 | - | - | - | |
| French Guiana | 7 | - | 1 | - | |
| Grenada | 17 | 1 | - | - | |
| Guatemala | 51 | 2 | - | - | |
| Guyana | 1 | - | - | - | |
| Haiti | 3 | - | - | - | |
| Honduras | 1 | 1 | - | - | |
| Mexico | 101 | 11 | 5 | 13 | |
| Nicaragua | 1 | 1 | - | - | |
| Panama | 78 | - | - | 1 | |
| Paraguay | 2 | - | - | - | |
| Peru | 49 | 2 | - | 13 | |
| Suriname | 15 | 6 | 1 | 1 | |
| Trinidad and Tobago | 7 | - | - | 2 | |
| USA | 377 | 34 | 6 | 173 | |
| Venezuela | 92 | 4 | 3 | 3 | |
Georeferenced and non-georeferenced occurrence data by species and area type: points (≤10 km2), wide areas (10-25 km2), small (25-100 km2) and large (>100 km2) polygons, for the nine American DVS (geographically independent sites (Site) and temporal independent occurrences (Occ)).
| Georeferenced | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 433 | 822 | 12 | 29 | 7 | 14 | 28 | 38 | 480 | 903 | |
| 164 | 482 | 5 | 33 | 13 | 48 | 126 | 131 | 308 | 694 | |
| 86 | 162 | 2 | 17 | 10 | 28 | 28 | 28 | 126 | 235 | |
| 488 | 859 | 25 | 67 | 15 | 106 | 124 | 153 | 652 | 1185 | |
| 31 | 35 | 7 | 28 | 1 | 1 | 5 | 6 | 44 | 70 | |
| 55 | 91 | 4 | 4 | 3 | 4 | 7 | 22 | 69 | 121 | |
| 199 | 433 | 11 | 34 | 14 | 14 | 116 | 121 | 340 | 602 | |
| 285 | 454 | 7 | 19 | 6 | 6 | 15 | 16 | 313 | 495 | |
| 356 | 542 | 27 | 30 | 6 | 22 | 168 | 509 | 557 | 1103 | |
| 44 | 109 | 5 | 7 | 2 | 2 | 2 | 2 | 55 | 125 | |
| 24 | 28 | 0 | 0 | 0 | 0 | 1 | 1 | 25 | 29 | |
| 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | |
| 117 | 120 | 0 | 0 | 1 | 1 | 1 | 1 | 122 | 132 | |
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |
| 7 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 7 | |
| 93 | 93 | 0 | 0 | 0 | 0 | 1 | 1 | 96 | 97 | |
| 29 | 32 | 6 | 42 | 1 | 1 | 2 | 2 | 38 | 77 | |
| 21 | 63 | 2 | 2 | 0 | 0 | 0 | 0 | 24 | 66 | |
Evaluation statistics and the top five environmental/climatic variables selected by the BRT for the nine DVS in the Americas using presence data plus 500 pseudo-presences generated from within the EO boundary (weight = 0.5) and a 1000 km buffer area for generation of 5:1 pseudo-absence:presence at a 5 km resolution.
| Species | Evaluation | Environmental variables | ||
|---|---|---|---|---|
| Deviance: | 0.2739 | 1 | LST (P1) | |
| Correlation: | 0.8278 | 2 | DEM | |
| Discrimination (AUC): | 0.9683 | 3 | Prec (P1) | |
| Kappa: | 0.7672 | 4 | LST (mean) | |
| 5 | LST (max) | |||
| Deviance: | 0.2919 | 1 | Prec (A1) | |
| Correlation: | 0.8207 | 2 | Prec (mean) | |
| Discrimination (AUC): | 0.9613 | 3 | DEM | |
| Kappa: | 0.7643 | 4 | LST (A1) | |
| 5 | NDVI (P1) | |||
| Deviance: | 0.3944 | 1 | DEM | |
| Correlation: | 0.7458 | 2 | Prec (P1) | |
| Discrimination (AUC): | 0.9443 | 3 | Prec (A2) | |
| Kappa: | 0.6386 | 4 | LST (P1) | |
| 5 | LST (max) | |||
| Deviance: | 0.2763 | 1 | Prec (max) | |
| Correlation: | 0.8351 | 2 | LST (max) | |
| Discrimination (AUC): | 0.9684 | 3 | Prec (mean) | |
| Kappa: | 0.7902 | 4 | LST (P2) | |
| 5 | Prec (P2) | |||
| Deviance: | 0.2932 | 1 | Prec (P1) | |
| Correlation: | 0.8191 | 2 | Prec (A1) | |
| Discrimination (AUC): | 0.9666 | 3 | Prec (max) | |
| Kappa: | 0.7573 | 4 | DEM | |
| 5 | LST (A1) | |||
| Deviance: | 0.3354 | 1 | Prec (P2) | |
| Correlation: | 0.7962 | 2 | Prec (A1) | |
| Discrimination (AUC): | 0.9482 | 3 | LST (P2) | |
| Kappa: | 0.7219 | 4 | NDVI (A1) | |
| 5 | Prec (min) | |||
| Deviance: | 0.3094 | 1 | Prec (max) | |
| Correlation: | 0.8161 | 2 | Prec (mean) | |
| Discrimination (AUC): | 0.9555 | 3 | LST (mean) | |
| Kappa: | 0.7633 | 4 | Prec (A1) | |
| 5 | LST (min) | |||
| Deviance: | 0.3567 | 1 | LST (P1) | |
| Correlation: | 0.7682 | 2 | DEM | |
| Discrimination (AUC): | 0.9432 | 3 | Prec (P1) | |
| Kappa: | 0.6768 | 4 | MIR (mean) | |
| 5 | MIR (P1) | |||
| Deviance: | 0.1237 | 1 | Prec (min) | |
| Correlation: | 0.9271 | 2 | Prec (mean) | |
| Discrimination (AUC): | 0.9904 | 3 | Prec (P1) | |
| Kappa: | 0.9080 | 4 | LST (A1) | |
| 5 | DEM | |||
Figure 1Map details: The predicted distribution of . Pseudo-absences (2840) were generated at a ratio of 5:1 absence to presence points, taking into account 250 pseudo-presence points (500 at half weight), and were randomly selected from within the 1000 km buffer surrounding the EO (EO shown in the inset map). Predictions are not shown beyond the buffer boundary. The black dots show the 318 occurrence records for An. darlingi. Map statistics: Deviance = 0.2763, Correlation = 0.8351, Discrimination (AUC) = 0.9684, Kappa = 0.7902. Environmental variables: 1. Prec (max), 2. LST (max), 3. Prec (mean), 4. LST (P2), 5. Prec (P2) (Please see Additional file 4 for abbreviations and definitions). Copyright: Licensed to the Malaria Atlas Project [197] under a Creative Commons Attribution 3.0 License. Citation: Sinka et al. (2010) The dominant Anopheles vectors of human malaria in the Americas: occurrence data, distribution maps and bionomic précis, Parasites and Vectors 2010, 3:72.
Small larval sites.
| Species | Source | Small natural water collections | Small man-made water collections | Artificial sites | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Small streams | Seepage springs | Pools | Wells | Dips in the ground | Other | Overflow water | Irrigation ditches | Borrow pits | Wheel ruts | Hoof prints | Puddles near rice fields | Other | |||
| Summary | 3 | 1 | 1 | 2 | 4 | 3 | |||||||||
| TAG | ● | ● | ● | ● | ● | ● | |||||||||
| Summary | 1 | 3 | 1 | ||||||||||||
| TAG | ● | ● | ● | ● | |||||||||||
| Summary | 2 | 1 | 1 | 1 | |||||||||||
| TAG | ● | ● | ● | ● | ● | ||||||||||
| Summary | 3 | 5 | 1 | 1 | 1 | ||||||||||
| TAG | ● | ● | ● | ● | ● | ||||||||||
| Summary | 1 | ||||||||||||||
| TAG | ● | ● | ● | ||||||||||||
| Summary | 1 | 1 | 1 | ||||||||||||
| TAG | ● | ● | ● | ● | ● | ● | ● | ||||||||
| Summary | 2 | 2 | 1 | 3 | 1 | ||||||||||
| TAG | ● | ● | ● | ● | |||||||||||
| Summary | 2 | 2 | 9 | 1 | 1 | ||||||||||
| TAG | ● | ○ | ● | ○ | |||||||||||
| Summary | 1 | 2 | 2 | 1 | 1 | 2 | |||||||||
| TAG | ● | ● | ● | ||||||||||||
TAG: Rubio-Palis & Manguin (unpub. obs., 2009, 2010), ● = typical, ○ = examples exist. Numbers indicate the number of studies that found larvae under each listed circumstance. Anopheles albitarsis refers to the An. albitarsis complex, which includes An. albitarsis, An. albitarsis sp. B, sp. E and An. deaneorum. Anopheles marajoara is listed separately.