Literature DB >> 20708072

Molecular phylogenetic study in genus Hydra.

Hitomi Kawaida1, Hiroshi Shimizu, Toshitaka Fujisawa, Hidenori Tachida, Yoshitaka Kobayakawa.   

Abstract

Among 8000-9000 species of Cnidaria, only several dozens of species of Hydrozoa have been found in the fresh water. Hydra is such a fresh water polyp and has been used as a good material for research in developmental biology, regeneration and pattern formation. Although the genus Hydra has only a few ten species, its distribution is cosmopolitan. The phylogenetic relationship between hydra species is fascinating from the aspect of evolutionary biology and biogeography. However, only a few molecular phylogenetic studies have been reported on hydra. Therefore, we conducted a molecular phylogenetic study of the genus Hydra based on mitochondrial and nuclear nucleotide sequences using a hydra collection that has been kept in the National Institute of Genetics (NIG) of Japan. The results support the idea that four species groups comprise the genus Hydra. Within the viridissima group (green hydra) and braueri group, genetic distances between strains were relatively large. In contrast, genetic distances between strains among the vulgaris and oligactis groups were small irrespective of their geographic distribution. The vulgaris group strains were classified at least (as far as our investigated samples) into three sub-groups, vulgaris sub-group, carnea sub-group, and H. sp. (K5 and K6) sub-group. All of the vulgaris sub-group and H. sp. (K5 and K6) sub-group strains were collected in Eurasia. The carnea sub-group strains in NIG collection were all collected in North America. A few newly collected samples in Japan, however, suggested belonging to the carnea sub-group according to the molecular phylogenic analysis. This suggests a trans-Pacific distribution of the carnea sub-group hydra.
Copyright © 2010 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20708072     DOI: 10.1016/j.gene.2010.08.002

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  5 in total

1.  Constant mortality and fertility over age in Hydra.

Authors:  Ralf Schaible; Alexander Scheuerlein; Maciej J Dańko; Jutta Gampe; Daniel E Martínez; James W Vaupel
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-07       Impact factor: 11.205

2.  Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata.

Authors:  Srikar Krishna; Aparna Nair; Sirisha Cheedipudi; Deepak Poduval; Jyotsna Dhawan; Dasaradhi Palakodeti; Yashoda Ghanekar
Journal:  Nucleic Acids Res       Date:  2012-11-19       Impact factor: 16.971

3.  Different Endosymbiotic Interactions in Two Hydra Species Reflect the Evolutionary History of Endosymbiosis.

Authors:  Masakazu Ishikawa; Ikuko Yuyama; Hiroshi Shimizu; Masafumi Nozawa; Kazuho Ikeo; Takashi Gojobori
Journal:  Genome Biol Evol       Date:  2016-08-03       Impact factor: 3.416

4.  Karyotypic analysis and isolation of four DNA markers of the scleractinian coral Favitespentagona (Esper, 1795) (Scleractinia, Anthozoa, Cnidaria).

Authors:  Rei Kawakami; Takahiro Taguchi; Joshua Vacarizas; Masumi Ito; Takuma Mezaki; Akira Tominaga; Satoshi Kubota
Journal:  Comp Cytogenet       Date:  2022-04-05       Impact factor: 1.800

5.  RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydra transcriptome.

Authors:  Yvan Wenger; Brigitte Galliot
Journal:  BMC Genomics       Date:  2013-03-25       Impact factor: 3.969

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.