Literature DB >> 20703926

Three-dimensional texture analysis of renal cell carcinoma cell nuclei for computerized automatic grading.

T Y Kim1, H J Choi, H G Hwang, H K Choi.   

Abstract

The extraction of important features in cancer cell image analysis is a key process in grading renal cell carcinoma. In this study, we analyzed the three-dimensional chromatin texture of cell nuclei based on digital image cytometry. Individual images of 2,423 cell nuclei were extracted from 80 renal cell carcinomas (RCCs) using confocal laser scanning microscopy (CLSM). First, we applied the 3D texture mapping method to render the volume of entire tissue sections. Then, we determined the chromatin texture quantitatively by calculating 3D gray level co-occurrence matrices and 3D run length matrices. Finally, to demonstrate the suitability of 3D texture features for classification, we performed a discriminant analysis. In addition, we conducted a principal component analysis to obtain optimized texture features. Automatic grading of cell nuclei using 3D texture features had an accuracy of 78.30%. Combining 3D textural and 3D morphological features improved the accuracy to 82.19%.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 20703926     DOI: 10.1007/s10916-009-9285-6

Source DB:  PubMed          Journal:  J Med Syst        ISSN: 0148-5598            Impact factor:   4.460


  10 in total

1.  Chromatin texture analysis in living cells.

Authors:  C Rousselle; S Paillasson; M Robert-Nicoud; X Ronot
Journal:  Histochem J       Date:  1999-01

2.  Wavelets as chromatin texture descriptors for the automated identification of neoplastic nuclei.

Authors:  G Van De Wouwer; B Weyn; P Scheunders; W Jacob; E Van Marck; D Van Dyck
Journal:  J Microsc       Date:  2000-01       Impact factor: 1.758

3.  Texture analysis for classification of cervix lesions.

Authors:  Q Ji; J Engel; E Craine
Journal:  IEEE Trans Med Imaging       Date:  2000-11       Impact factor: 10.048

4.  Three-dimensional visualization and quantitative analysis of cervical cell nuclei with confocal laser scanning microscopy.

Authors:  Hyun-Ju Choi; Ik-Hwan Choi; Tae-Yun Kim; Nam-Hoon Cho; Heung-Kook Choi
Journal:  Anal Quant Cytol Histol       Date:  2005-06       Impact factor: 0.302

5.  Three-dimensional DNA image cytometry by confocal scanning laser microscopy in thick tissue blocks of prostatic lesions.

Authors:  T Irinopoulou; J Vassy; M Beil; P Nicolopoulou; D Encaoua; J P Rigaut
Journal:  Cytometry       Date:  1997-02-01

6.  Characterization of chromatin distribution in cell nuclei.

Authors:  I T Young; P W Verbeek; B H Mayall
Journal:  Cytometry       Date:  1986-09

7.  Morphological feature extraction for the classification of digital images of cancerous tissues.

Authors:  J P Thiran; B Macq
Journal:  IEEE Trans Biomed Eng       Date:  1996-10       Impact factor: 4.538

8.  Development of 3D chromatin texture analysis using confocal laser scanning microscopy.

Authors:  André Huisman; Lennert S Ploeger; Hub F J Dullens; Neal Poulin; William E Grizzle; Paul J van Diest
Journal:  Cell Oncol       Date:  2005       Impact factor: 6.730

Review 9.  A feature set for cytometry on digitized microscopic images.

Authors:  Karsten Rodenacker; Ewert Bengtsson
Journal:  Anal Cell Pathol       Date:  2003       Impact factor: 2.916

10.  The chromatin pattern of cell nuclei is of prognostic value for renal cell carcinomas.

Authors:  C François; M Remmelink; M Petein; R van Velthoven; A Danguy; E Wespes; I Salmon; R Kiss; C Decaestecker
Journal:  Anal Cell Pathol       Date:  1998       Impact factor: 2.916

  10 in total
  5 in total

1.  Quantitative characterization of preneoplastic progression using single-cell computed tomography and three-dimensional karyometry.

Authors:  Vivek Nandakumar; Laimonas Kelbauskas; Roger Johnson; Deirdre Meldrum
Journal:  Cytometry A       Date:  2011-01       Impact factor: 4.355

2.  An advanced image analysis tool for the quantification and characterization of breast cancer in microscopy images.

Authors:  Theodosios Goudas; Ilias Maglogiannis
Journal:  J Med Syst       Date:  2015-02-14       Impact factor: 4.460

3.  3D texture analysis in renal cell carcinoma tissue image grading.

Authors:  Tae-Yun Kim; Nam-Hoon Cho; Goo-Bo Jeong; Ewert Bengtsson; Heung-Kook Choi
Journal:  Comput Math Methods Med       Date:  2014-10-09       Impact factor: 2.238

4.  Modified Gray-Level Haralick Texture Features for Early Detection of Diabetes Mellitus and High Cholesterol with Iris Image.

Authors:  Rinci Kembang Hapsari; Miswanto Miswanto; Riries Rulaningtyas; Herry Suprajitno; Gan Hong Seng
Journal:  Int J Biomed Imaging       Date:  2022-04-20

5.  NMJ-Analyser identifies subtle early changes in mouse models of neuromuscular disease.

Authors:  Elizabeth M C Fisher; Carole H Sudre; Alan Mejia Maza; Seth Jarvis; Weaverly Colleen Lee; Thomas J Cunningham; Giampietro Schiavo; Maria Secrier; Pietro Fratta; James N Sleigh
Journal:  Sci Rep       Date:  2021-06-10       Impact factor: 4.379

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.