Literature DB >> 20694529

Market Basket Analysis: a new tool in ecology to describe chemical relations in the environment--a case study of the fern Athyrium distentifolium in the Tatra National Park in Poland.

Aleksandra Samecka-Cymerman1, Andrzej Stankiewicz, Krzysztof Kolon, Alexander J Kempers, Rob S E W Leuven.   

Abstract

In this study, the novel data mining technique Market Basket Analysis (MBA) was applied for the first time in biogeochemical and ecological investigations. The method was tested on the fern Athyrium distentifolium, in which we measured concentrations of the elements Ca, Cd, Cr, Cu, Fe, K, Mg, Mn, Na, Ni, Pb, and Zn. Plants were sampled from sites with different types of bedrock in the Tatra National Park in Poland. MBA was used to investigate whether specimens of Athyrium distentifolium that contain elevated levels of certain elements occur more frequently on a specific type of bedrock and to identify relationships between the type of bedrock and the concentrations of the elements in this fern. The results were compared with those of the commonly used principal component and classification analysis (PCCA) technique. MBA and PCCA ordination both yielded distinct groups of ferns growing on different types of bedrock. Although the results of MBA and PCCA were similar, MBA has the advantage of being independent of the size of the data set. In addition, MBA revealed not only dominant elements but, in the case of limestone bedrock, also showed very low concentrations of Cd, Fe, Mn, and Pb in ferns growing on this type of parent material. MBA, thus, appeared to be a promising data mining method to reveal chemical relations in the environment as well as the accumulation of chemical elements in bioindicators. This technique can be used to reveal associations and correlations among items in large data sets collected on a national or even larger scale.

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Year:  2010        PMID: 20694529     DOI: 10.1007/s10886-010-9832-0

Source DB:  PubMed          Journal:  J Chem Ecol        ISSN: 0098-0331            Impact factor:   2.626


  4 in total

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Authors:  S Otto; M Vianello; A Infantino; G Zanin; A Di Guardo
Journal:  Chemosphere       Date:  2007-11-28       Impact factor: 7.086

Review 2.  New international long-term ecological research on air pollution effects on the Carpathian Mountain forests, Central Europe.

Authors:  Andrzej Bytnerowicz; Ovidiu Badea; Ion Barbu; Peter Fleischer; Witold Fraczek; Vladimir Gancz; Barbara Godzik; Krystyna Grodzińska; Wojciech Grodzki; David Karnosky; Milan Koren; Marek Krywult; Zbigniew Krzan; Roman Longauer; Blanka Mankovska; William J Manning; Michael McManus; Robert C Musselman; Julius Novotny; Flaviu Popescu; Daniela Postelnicu; Wiesław Prus-Głowacki; Paweł Skawiński; Stefan Skiba; Robert Szaro; Stefan Tamas; Cristian Vasile
Journal:  Environ Int       Date:  2003-06       Impact factor: 9.621

3.  Heavy metals in aquatic bryophytes from the Ore mountains (Germany).

Authors:  A Samecka-Cymerman; K Kolon; A Kempers
Journal:  Ecotoxicol Environ Saf       Date:  2002-07       Impact factor: 6.291

4.  Self-organizing feature map (neural networks) as a tool in classification of the relations between chemical composition of aquatic bryophytes and types of streambeds in the Tatra national park in Poland.

Authors:  A Samecka-Cymerman; A Stankiewicz; K Kolon; A J Kempers
Journal:  Chemosphere       Date:  2006-12-12       Impact factor: 7.086

  4 in total
  1 in total

1.  Heavy metal accumulation in Pyrrosia flocculosa (D. Don) Ching growing in sites located along a vehicular disturbance gradient.

Authors:  Alpy Sharma; Sanjay Kr Uniyal
Journal:  Environ Monit Assess       Date:  2016-09-03       Impact factor: 2.513

  1 in total

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