Literature DB >> 20692231

Lipid chain branching at the iso- and anteiso-positions in complex Chlamydia membranes: a molecular dynamics study.

Joseph B Lim1, Jeffery B Klauda.   

Abstract

Membranes in the intracellular eubacterial parasite Chlamydia trachomatis consist of the elementary body (EB) and reticular body (RB), and contain methyl branches at the iso- and anteiso-positions for some phospholipid chains. Acyl chain branching is the focus of this study. Molecular dynamics simulations were used to study bilayers of 1-13-methylpentadecanoyl-2-palmitoyl-phosphatidylcholine (13-MpPPC), 1-14-methylpentadecanoyl-2-palmitoyl-phosphatidylcholine (14-MpPPC), and diphytanoylphosphatidylcholine (DPhPC). These three membranes were simulated at 323K and simulations of DPhPC at 298K were also performed for better comparison to existing experimental data. Two simulations of representative EB and RB membranes of C. trachomatis composed of nine different lipid components were performed at 310.15K, to accurately reflect compositions determined by experiment and physiological conditions. Based on nearly 0.5μs of simulation data, we report that branching increases average lipid surface area, area elastic moduli, and lipid axial relaxation times, while decreasing lipid chain order. Branching also has a distinct effect on electron density profiles. Due to their high cholesterol concentrations, the EB and RB membranes were found to have relatively high area elastic moduli, which may have important biological implications.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20692231     DOI: 10.1016/j.bbamem.2010.07.036

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  14 in total

1.  Computer simulations of protein-membrane systems.

Authors:  Jennifer Loschwitz; Olujide O Olubiyi; Jochen S Hub; Birgit Strodel; Chetan S Poojari
Journal:  Prog Mol Biol Transl Sci       Date:  2020-02-26       Impact factor: 3.622

2.  Parameterization of the CHARMM All-Atom Force Field for Ether Lipids and Model Linear Ethers.

Authors:  Alison N Leonard; Richard W Pastor; Jeffery B Klauda
Journal:  J Phys Chem B       Date:  2018-06-21       Impact factor: 2.991

3.  CHARMM-GUI Membrane Builder toward realistic biological membrane simulations.

Authors:  Emilia L Wu; Xi Cheng; Sunhwan Jo; Huan Rui; Kevin C Song; Eder M Dávila-Contreras; Yifei Qi; Jumin Lee; Viviana Monje-Galvan; Richard M Venable; Jeffery B Klauda; Wonpil Im
Journal:  J Comput Chem       Date:  2014-08-07       Impact factor: 3.376

4.  Mass spectrometry-directed structure elucidation and total synthesis of ultra-long chain (O-acyl)-ω-hydroxy fatty acids.

Authors:  Sarah E Hancock; Ramesh Ailuri; David L Marshall; Simon H J Brown; Jennifer T Saville; Venkateswara R Narreddula; Nathan R Boase; Berwyck L J Poad; Adam J Trevitt; Mark D P Willcox; Michael J Kelso; Todd W Mitchell; Stephen J Blanksby
Journal:  J Lipid Res       Date:  2018-06-15       Impact factor: 5.922

Review 5.  Mechanical properties of lipid bilayers from molecular dynamics simulation.

Authors:  Richard M Venable; Frank L H Brown; Richard W Pastor
Journal:  Chem Phys Lipids       Date:  2015-07-31       Impact factor: 3.329

6.  Mechanical properties of ester- and ether-DPhPC bilayers: A molecular dynamics study.

Authors:  Ali Rasouli; Yousef Jamali; Emad Tajkhorshid; Omid Bavi; Hossein Nejat Pishkenari
Journal:  J Mech Behav Biomed Mater       Date:  2021-02-11

Review 7.  Computational Modeling of Realistic Cell Membranes.

Authors:  Siewert J Marrink; Valentina Corradi; Paulo C T Souza; Helgi I Ingólfsson; D Peter Tieleman; Mark S P Sansom
Journal:  Chem Rev       Date:  2019-01-09       Impact factor: 72.087

Review 8.  Structural Significance of Lipid Diversity as Studied by Small Angle Neutron and X-ray Scattering.

Authors:  Norbert Kučerka; Frederick A Heberle; Jianjun Pan; John Katsaras
Journal:  Membranes (Basel)       Date:  2015-09-21

9.  Remodeling of host phosphatidylcholine by Chlamydia acyltransferase is regulated by acyl-CoA binding protein ACBD6 associated with lipid droplets.

Authors:  Eric Soupene; Derek Wang; Frans A Kuypers
Journal:  Microbiologyopen       Date:  2015-01-21       Impact factor: 3.139

10.  Large-Conductance Transmembrane Porin Made from DNA Origami.

Authors:  Kerstin Göpfrich; Chen-Yu Li; Maria Ricci; Satya Prathyusha Bhamidimarri; Jejoong Yoo; Bertalan Gyenes; Alexander Ohmann; Mathias Winterhalter; Aleksei Aksimentiev; Ulrich F Keyser
Journal:  ACS Nano       Date:  2016-08-23       Impact factor: 15.881

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