Literature DB >> 20691811

Further evidence of constrained radiation in the evolution of pathogenic Escherichia coli O157:H7.

Shana R Leopold1, Nurmohammad Shaikh, Phillip I Tarr.   

Abstract

Escherichia coli O157:H7 is a human pathogen that has emerged from its less pathogenic progenitor, E. coli O55:H7, to form the EHEC 1 clade. In its emergence, E. coli O157:H7 formed three distinct clusters, each of which exists today. Sequencing and SNP analysis of Cluster 1 of this clade demonstrated constrained radiation from the cluster founder. Here we investigated the diversity of Cluster 2 strains by sequencing signature SNPs in six strains collected throughout Washington State. Our results suggest that successful Cluster 2 strains have radiated on only two branches from their founder; one of these two branches leads to Cluster 3. Constrained radiation appears to be a common theme among this pathogenic clade.
Copyright © 2010. Published by Elsevier B.V.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20691811      PMCID: PMC3742067          DOI: 10.1016/j.meegid.2010.07.021

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  10 in total

1.  Genotypic variation in pathogenic Escherichia coli O157:H7 isolated from patients in Washington, 1984-1987.

Authors:  P I Tarr; M A Neill; C R Clausen; J W Newland; R J Neill; S L Moseley
Journal:  J Infect Dis       Date:  1989-02       Impact factor: 5.226

2.  A statewide outbreak of Escherichia coli O157:H7 infections in Washington State.

Authors:  S M Ostroff; P M Griffin; R V Tauxe; L D Shipman; K D Greene; J G Wells; J H Lewis; P A Blake; J M Kobayashi
Journal:  Am J Epidemiol       Date:  1990-08       Impact factor: 4.897

3.  Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

Authors:  T Hayashi; K Makino; M Ohnishi; K Kurokawa; K Ishii; K Yokoyama; C G Han; E Ohtsubo; K Nakayama; T Murata; M Tanaka; T Tobe; T Iida; H Takami; T Honda; C Sasakawa; N Ogasawara; T Yasunaga; S Kuhara; T Shiba; M Hattori; H Shinagawa
Journal:  DNA Res       Date:  2001-02-28       Impact factor: 4.458

Review 4.  Illnesses associated with Escherichia coli O157:H7 infections. A broad clinical spectrum.

Authors:  P M Griffin; S M Ostroff; R V Tauxe; K D Greene; J G Wells; J H Lewis; P A Blake
Journal:  Ann Intern Med       Date:  1988-11-01       Impact factor: 25.391

5.  High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi.

Authors:  Kathryn E Holt; Julian Parkhill; Camila J Mazzoni; Philippe Roumagnac; François-Xavier Weill; Ian Goodhead; Richard Rance; Stephen Baker; Duncan J Maskell; John Wain; Christiane Dolecek; Mark Achtman; Gordon Dougan
Journal:  Nat Genet       Date:  2008-07-27       Impact factor: 38.330

6.  Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: integrations, excisions, truncations, and evolutionary implications.

Authors:  Nurmohammad Shaikh; Phillip I Tarr
Journal:  J Bacteriol       Date:  2003-06       Impact factor: 3.490

7.  A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis.

Authors:  Shana R Leopold; Vincent Magrini; Nicholas J Holt; Nurmohammad Shaikh; Elaine R Mardis; Joseph Cagno; Yoshitoshi Ogura; Atsushi Iguchi; Tetsuya Hayashi; Alexander Mellmann; Helge Karch; Thomas E Besser; Stanley A Sawyer; Thomas S Whittam; Phillip I Tarr
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-13       Impact factor: 11.205

8.  Fim operon variation in the emergence of Enterohemorrhagic Escherichia coli: an evolutionary and functional analysis.

Authors:  Nurmohammad Shaikh; Nicholas J Holt; James R Johnson; Phillip I Tarr
Journal:  FEMS Microbiol Lett       Date:  2007-06-06       Impact factor: 2.742

9.  Escherichia coli O157:H7 infections: discordance between filterable fecal shiga toxin and disease outcome.

Authors:  Nancy A Cornick; Srdjan Jelacic; Marcia A Ciol; Phillip I Tarr
Journal:  J Infect Dis       Date:  2002-06-10       Impact factor: 5.226

10.  Shiga toxin-producing Escherichia coli in children with diarrhea: a prospective point-of-care study.

Authors:  Eileen J Klein; Jennifer R Stapp; Carla R Clausen; Daniel R Boster; Joy G Wells; Xuan Qin; David L Swerdlow; Phillip I Tarr
Journal:  J Pediatr       Date:  2002-08       Impact factor: 4.406

  10 in total
  11 in total

1.  Precise dissection of an Escherichia coli O157:H7 outbreak by single nucleotide polymorphism analysis.

Authors:  George Turabelidze; Steven J Lawrence; Hongyu Gao; Erica Sodergren; George M Weinstock; Sahar Abubucker; Todd Wylie; Makedonka Mitreva; Nurmohammad Shaikh; Romesh Gautom; Phillip I Tarr
Journal:  J Clin Microbiol       Date:  2013-09-18       Impact factor: 5.948

2.  Molecular typing of Escherichia coli O157:H7 isolates from Swedish cattle and human cases: population dynamics and virulence.

Authors:  R Söderlund; C Jernberg; S Ivarsson; I Hedenström; E Eriksson; E Bongcam-Rudloff; A Aspán
Journal:  J Clin Microbiol       Date:  2014-08-20       Impact factor: 5.948

3.  Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage.

Authors:  Jennifer L Kyle; Craig A Cummings; Craig T Parker; Beatriz Quiñones; Paolo Vatta; Elizabeth Newton; Steven Huynh; Michelle Swimley; Lovorka Degoricija; Melissa Barker; Samar Fontanoz; Kimberly Nguyen; Ronak Patel; Rixun Fang; Robert Tebbs; Olga Petrauskene; Manohar Furtado; Robert E Mandrell
Journal:  J Bacteriol       Date:  2012-02-10       Impact factor: 3.490

Review 4.  Future perspectives, applications and challenges of genomic epidemiology studies for food-borne pathogens: A case study of Enterohemorrhagic Escherichia coli (EHEC) of the O157:H7 serotype.

Authors:  Mark Eppinger; Thomas A Cebula
Journal:  Gut Microbes       Date:  2014-09-01

5.  Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.

Authors:  Sean M Griffing; Duncan R MacCannell; Amber J Schmidtke; Molly M Freeman; Eija Hyytiä-Trees; Peter Gerner-Smidt; Efrain M Ribot; James L Bono
Journal:  PLoS One       Date:  2015-07-01       Impact factor: 3.240

6.  Genetic and Virulence Profiles of Enteroaggregative Escherichia coli (EAEC) Isolated From Deployed Military Personnel (DMP) With Travelers' Diarrhea.

Authors:  Courtney D Petro; Jeffrey K Duncan; Yuliya I Seldina; Anna Allué-Guardia; Mark Eppinger; Mark S Riddle; David R Tribble; Ryan C Johnson; Clifton L Dalgard; Gauthaman Sukumar; Patrick Connor; Nadia Boisen; Angela R Melton-Celsa
Journal:  Front Cell Infect Microbiol       Date:  2020-05-20       Impact factor: 5.293

7.  Pathogenomes of Atypical Non-shigatoxigenic Escherichia coli NSF/SF O157:H7/NM: Comprehensive Phylogenomic Analysis Using Closed Genomes.

Authors:  Emmanuel C Nyong; Sam R Zaia; Anna Allué-Guardia; Armando L Rodriguez; Zaina Irion-Byrd; Sara S K Koenig; Peter Feng; James L Bono; Mark Eppinger
Journal:  Front Microbiol       Date:  2020-04-15       Impact factor: 5.640

8.  Contribution and Interaction of Shiga Toxin Genes to Escherichia coli O157:H7 Virulence.

Authors:  Gillian A M Tarr; Taryn Stokowski; Smriti Shringi; Phillip I Tarr; Stephen B Freedman; Hanna N Oltean; Peter M Rabinowitz; Linda Chui
Journal:  Toxins (Basel)       Date:  2019-10-18       Impact factor: 4.546

9.  EspZ of enteropathogenic and enterohemorrhagic Escherichia coli regulates type III secretion system protein translocation.

Authors:  Cedric N Berger; Valerie F Crepin; Kobi Baruch; Aurelie Mousnier; Ilan Rosenshine; Gad Frankel
Journal:  MBio       Date:  2012-10-02       Impact factor: 7.867

10.  Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages.

Authors:  Shuang Yin; Brigida Rusconi; Fatemeh Sanjar; Kakolie Goswami; Lingzi Xiaoli; Mark Eppinger; Edward G Dudley
Journal:  BMC Genomics       Date:  2015-09-29       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.