Literature DB >> 20689509

Basics of multivariate analysis in neuroimaging data.

Christian Georg Habeck1.   

Abstract

Multivariate analysis techniques for neuroimaging data have recently received increasing attention as they have many attractive features that cannot be easily realized by the more commonly used univariate, voxel-wise, techniques(1,4,5,6,7). Multivariate approaches evaluate correlation/covariance of activation across brain regions, rather than proceeding on a voxel-by-voxel basis. Thus, their results can be more easily interpreted as a signature of neural networks. Univariate approaches, on the other hand, cannot directly address interregional correlation in the brain. Multivariate approaches can also result in greater statistical power when compared with univariate techniques, which are forced to employ very stringent corrections for voxel-wise multiple comparisons. Further, multivariate techniques also lend themselves much better to prospective application of results from the analysis of one dataset to entirely new datasets. Multivariate techniques are thus well placed to provide information about mean differences and correlations with behavior, similarly to univariate approaches, with potentially greater statistical power and better reproducibility checks. In contrast to these advantages is the high barrier of entry to the use of multivariate approaches, preventing more widespread application in the community. To the neuroscientist becoming familiar with multivariate analysis techniques, an initial survey of the field might present a bewildering variety of approaches that, although algorithmically similar, are presented with different emphases, typically by people with mathematics backgrounds. We believe that multivariate analysis techniques have sufficient potential to warrant better dissemination. Researchers should be able to employ them in an informed and accessible manner. The current article is an attempt at a didactic introduction of multivariate techniques for the novice. A conceptual introduction is followed with a very simple application to a diagnostic data set from the Alzheimer s Disease Neuroimaging Initiative (ADNI), clearly demonstrating the superior performance of the multivariate approach.

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Year:  2010        PMID: 20689509      PMCID: PMC3074457          DOI: 10.3791/1988

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  8 in total

1.  A new approach to spatial covariance modeling of functional brain imaging data: ordinal trend analysis.

Authors:  Christian Habeck; John W Krakauer; Claude Ghez; Harold A Sackeim; David Eidelberg; Yaakov Stern; James R Moeller
Journal:  Neural Comput       Date:  2005-07       Impact factor: 2.026

2.  Partial least squares analysis of neuroimaging data: applications and advances.

Authors:  Anthony Randal McIntosh; Nancy J Lobaugh
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

3.  Multivariate and univariate neuroimaging biomarkers of Alzheimer's disease.

Authors:  Christian Habeck; Norman L Foster; Robert Perneczky; Alexander Kurz; Panagiotis Alexopoulos; Robert A Koeppe; Alexander Drzezga; Yaakov Stern
Journal:  Neuroimage       Date:  2008-02-14       Impact factor: 6.556

4.  A regional covariance approach to the analysis of functional patterns in positron emission tomographic data.

Authors:  J R Moeller; S C Strother
Journal:  J Cereb Blood Flow Metab       Date:  1991-03       Impact factor: 6.200

5.  Spatial pattern analysis of functional brain images using partial least squares.

Authors:  A R McIntosh; F L Bookstein; J V Haxby; C L Grady
Journal:  Neuroimage       Date:  1996-06       Impact factor: 6.556

6.  Covariance PET patterns in early Alzheimer's disease and subjects with cognitive impairment but no dementia: utility in group discrimination and correlations with functional performance.

Authors:  Nikolaos Scarmeas; Christian G Habeck; Eric Zarahn; Karen E Anderson; Aileen Park; John Hilton; Gregory H Pelton; Matthias H Tabert; Lawrence S Honig; James R Moeller; Davangere P Devanand; Yaakov Stern
Journal:  Neuroimage       Date:  2004-09       Impact factor: 6.556

7.  Examining the multifactorial nature of cognitive aging with covariance analysis of positron emission tomography data.

Authors:  Karen L Siedlecki; Christian G Habeck; Adam M Brickman; Yunglin Gazes; Yaakov Stern
Journal:  J Int Neuropsychol Soc       Date:  2009-08-27       Impact factor: 2.892

8.  Scaled subprofile model: a statistical approach to the analysis of functional patterns in positron emission tomographic data.

Authors:  J R Moeller; S C Strother; J J Sidtis; D A Rottenberg
Journal:  J Cereb Blood Flow Metab       Date:  1987-10       Impact factor: 6.200

  8 in total
  14 in total

Review 1.  The Alzheimer's Disease Neuroimaging Initiative: a review of papers published since its inception.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; Enchi Liu; John C Morris; Ronald C Petersen; Andrew J Saykin; Mark E Schmidt; Leslie Shaw; Judith A Siuciak; Holly Soares; Arthur W Toga; John Q Trojanowski
Journal:  Alzheimers Dement       Date:  2011-11-02       Impact factor: 21.566

2.  Benfotiamine and Cognitive Decline in Alzheimer's Disease: Results of a Randomized Placebo-Controlled Phase IIa Clinical Trial.

Authors:  Gary E Gibson; José A Luchsinger; Rosanna Cirio; Huanlian Chen; Jessica Franchino-Elder; Joseph A Hirsch; Lucien Bettendorff; Zhengming Chen; Sarah A Flowers; Linda M Gerber; Thomas Grandville; Nicole Schupf; Hui Xu; Yaakov Stern; Christian Habeck; Barry Jordan; Pasquale Fonzetti
Journal:  J Alzheimers Dis       Date:  2020       Impact factor: 4.472

Review 3.  2014 Update of the Alzheimer's Disease Neuroimaging Initiative: A review of papers published since its inception.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Jesse Cedarbaum; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; Johan Luthman; John C Morris; Ronald C Petersen; Andrew J Saykin; Leslie Shaw; Li Shen; Adam Schwarz; Arthur W Toga; John Q Trojanowski
Journal:  Alzheimers Dement       Date:  2015-06       Impact factor: 21.566

4.  Identification of disease-related spatial covariance patterns using neuroimaging data.

Authors:  Phoebe Spetsieris; Yilong Ma; Shichun Peng; Ji Hyun Ko; Vijay Dhawan; Chris C Tang; David Eidelberg
Journal:  J Vis Exp       Date:  2013-06-26       Impact factor: 1.355

5.  Identification and validation of Alzheimer's disease-related metabolic brain pattern in biomarker confirmed Alzheimer's dementia patients.

Authors:  Matej Perovnik; Petra Tomše; Jan Jamšek; Andreja Emeršič; Chris Tang; David Eidelberg; Maja Trošt
Journal:  Sci Rep       Date:  2022-07-11       Impact factor: 4.996

6.  Parkinson's disease-related network topographies characterized with resting state functional MRI.

Authors:  An Vo; Wataru Sako; Koji Fujita; Shichun Peng; Paul J Mattis; Frank M Skidmore; Yilong Ma; Aziz M Uluğ; David Eidelberg
Journal:  Hum Brain Mapp       Date:  2016-05-21       Impact factor: 5.038

Review 7.  The Alzheimer's Disease Neuroimaging Initiative: a review of papers published since its inception.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; Enchi Liu; John C Morris; Ronald C Petersen; Andrew J Saykin; Mark E Schmidt; Leslie Shaw; Li Shen; Judith A Siuciak; Holly Soares; Arthur W Toga; John Q Trojanowski
Journal:  Alzheimers Dement       Date:  2013-08-07       Impact factor: 21.566

8.  Optimized prediction of cognition based on brain morphometry across the adult life span.

Authors:  Angeliki Tsapanou; Yaakov Stern; Christian Habeck
Journal:  Neurobiol Aging       Date:  2020-04-24       Impact factor: 4.673

9.  Age-related alterations in the cerebrovasculature affect neurovascular coupling and BOLD fMRI responses: Insights from animal models of aging.

Authors:  Andriy Yabluchanskiy; Adam Nyul-Toth; Anna Csiszar; Rafal Gulej; Debra Saunders; Rheal Towner; Monroe Turner; Yuguang Zhao; Dema Abdelkari; Bart Rypma; Stefano Tarantini
Journal:  Psychophysiology       Date:  2020-11-03       Impact factor: 4.348

10.  Common Genetic Variant in VIT Is Associated with Human Brain Asymmetry.

Authors:  Sayed H Tadayon; Maryam Vaziri-Pashkam; Pegah Kahali; Mitra Ansari Dezfouli; Abdolhossein Abbassian
Journal:  Front Hum Neurosci       Date:  2016-05-24       Impact factor: 3.169

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