| Literature DB >> 20684755 |
Kristofer Severinsson1, Thomas G Jaenson, John Pettersson, Kerstin Falk, Kenneth Nilsson.
Abstract
BACKGROUND: Tick-borne Anaplasma phagocytophilum and Rickettsia spp. are considered to be emerging human pathogens, but only limited data are available on their occurrence in Sweden. Two real-time PCR assays followed by nested PCR and sequence analysis were carried out to investigate the prevalence of A. phagocytophilum and spotted fever rickettsiae in ticks from seven areas in Sweden.Entities:
Year: 2010 PMID: 20684755 PMCID: PMC2923137 DOI: 10.1186/1756-3305-3-66
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Number of ticks and samples (in brackets) per tick stage and area.
| Area | Larvae | Nymph | Adult Male | Adult Female | Total |
|---|---|---|---|---|---|
| 12 (2) | 100 (10) | 6 (1) | 3 (2) | 121 (15) | |
| 25 (3) | 175 (22) | 15 (4) | 19 (6) | 234 (35) | |
| 33 (3) | 175 (13) | 7 (2) | 3 (1) | 218 (19) | |
| 2 (1) | 327 (23) | 7 (3) | 14 (3) | 350 (30) | |
| 87 (10) | 30 (6) | 2 (2) | 1 (1) | 120 (19) | |
| 45 (3) | 105 (11) | 1 (1) | 0 (0) | 151 (15) | |
| 0 (0) | 51 (6) | 0 (0) | 0 (0) | 51 (6) | |
| 204 (22) | 963 (91) | 38 (13) | 40 (13) | 1245 (139) |
Anaplasma phagocytophilum Number and percent of positive samples, number of ticks in the positive samples and possible infection rate calculated as a minimum-maximum range descriptive of one or all of the ticks were positive in each positive pool.
| Area | Larvae | Nymph | Adult Male | Adult Female | Total |
|---|---|---|---|---|---|
| 0 | 1/(10)/10/(1-10) | 0 | 0 | 1/(8.8)/10/(0.8-8.3) | |
| 0 | 2/(9.1)/16/(1.1-9.1) | 0 | 0 | 2/(5.7)/16/(0.9-6.8) | |
| 0 | 6/(46.1)/80/(3.4-45.7) | 0 | 0 | 6/(31.5)/80/(2.8-36.7) | |
| 0 | 4/(17.4)/51/(1.2-16.6) | 0 | 0 | 4/(13.3)/51/(1.1-14.6) | |
| 0 | 0 | 0 | 0/(0)/19/NA | ||
| 0 | 2/(18.1)/20/(1.9-19-0) | 0 | 0 | 2/(13.3)/20/(1.3-13.2) | |
| 0 | 1/(16)/10/(1.9-19.6) | 0 | 0 | 1/(16.6)/10/(1.7-19.6) | |
| 0 | 16/(17.5)/187/(1.7-19.4) | 0 | 0 | 16/(11.5)/187/(1.3-15.0) |
The total ranges are calculated per area, stage and for the whole material. S = sample, NA = not applicable, T = tick, % = percent
R. Helvetica Number and percent of positive samples, number of ticks in the positive samples and possible infection rate calculated as a minimum-maximun range descriptive of one or all of the ticks were positive in each positive pool.
| Area | Larvae | Nymph | Adult Male | Adult Female | Total |
|---|---|---|---|---|---|
| 0 | 2/(20)/20/(2-20) | 0 | 0 | 2/(13.3)/20/(2-16.5) | |
| 0 | 1/(4.5)/6/(0.6-3.4) | 1/(25)/4/(6.6-26) | 0 | 2/(5.7)/10/(0.8-4.2) | |
| 1/(38)/15/(3-45) | 5/(38)/75/(2.9-42) | 0 | 0 | 6/(31)/90/(2.8-41.2) | |
| 0 | 0 | 0 | 0 | 0/(0)/30/(0) | |
| 0 | 0 | 0 | 0 | 0/(0)/19/(0) | |
| 1/(33)/20/(2.2-44) | 5/(45)/50/(4.8-47.6) | 0 | 0 | 6/(40)/70/(4-47) | |
| 0 | 3/(50)/25/(5.8-49) | 0 | 0 | 3/(50)/25/(5.8-49) | |
| 2/(9.1)/35/(1.0-17.2) | 16/(17.5)/176/(1.6-18) | 1/(7.6)/4/(2.6-10) | 0 | 19/(13.7)/215/1.5-17.3) |
The total ranges are calculated per area, stage and for the whole material. For abbreviations, see Table 2
Summary of total number (No) of positive samples (S)/(%) positive S/No of ticks in samples positive for A. phagocytophilum and R. helvetica /(min-max infection rate %) for each tick stage and whole material from coastal (L+B+T+N) and inland (A+V+L) localities.
| Larvae | Nymph | Adult Male | Adult Female | TOTAL | |
|---|---|---|---|---|---|
| 47 (6) | 653 (52) | 20 (6) | 20 (6) | 740 (70) | |
| 0 | 12/(23.1)/151/(1.8-23.1) | 0 | 0 | 13/(18.6)/152/(1.8-20.5) | |
| 1/(16)/15/(2.1-31.9) | 10/(19.2)/120/(1.5-18.4) | 0 | 0 | 11/(15.7)/135/(1.5-18.2) | |
| 157/(16) | 310/(39) | 18 (7) | 20 (7) | 505 (69) | |
| 0 | 4/(10.3)/35/(1.3-25.9) | 0 | 0 | 5/(7,2)/42/(1.0-8.3) | |
| 1/(6.3)/20/(0.6-12.7) | 6/(15.4)/56/(1.9-18.1) | 1/(14.3)/4/(5.5-22.2) | 0 | 8/(11.5)/80/(1.6-15.8) |
Rh = R. helvetica, Ap = A. phagocytophilum. For other abbreviations, see Table 2
Figure 1Location of the seven study areas in which ticks were collected. Lidingö (L), Alsike (A), Torö (T), Bogesund (B), Västerås (V), Lidköping (Li), Norrbyskär (N).
Details of selected primers and probe used to amplify Anaplasma (msp2, 16 S RNA) and Rickettsia genes (ompB,17 kDa, gltA).
| Primer | Gene | Nucleotide sequences (5' to 3') | Product size (bp) |
|---|---|---|---|
| Apmsp2f | ATG-GAA-GGT-AGT-GTT-GGT-TAT-GGT-ATT | 77 | |
| Apmsp2r | TAC-GAG-CGC-TTC--AAG-ACC-AA | ||
| Apmsp2p | TGG-TGC-CAG-GGT-TGA-GCT-TGA-GAT-TG | probe | |
| GER-3 | 16 S RNA | TAG-ATC-CTT-CTT-AAC-GGA-AGG-GCG | 151 |
| GER-4 | AAG-TGC-CCG-GCT-TAA-CCC-GCT-GGC | ||
| EE-1 | 16 S RNA | TCC-TGG-CTC-AGA-ACG-AAC-GCT-GGC-GGC | 928 |
| EE-2 | AGT-CAC-TGA-CCC-AAC-CTT-AAA-TGG-CTG | ||
| EE-3 | GTC-GAA-CGG-ATT-ATT-CTT-TAT-AGC-TTG-C | ||
| EE-4 | CCC-TTC-CGT-TAA-GAA-GGA-TCT-AAT-CTC-C | ||
| OMP B-IF | CCA-ATG-GCA-GGA-CTT-AGC-TAC-T | 257 | |
| OMP B-IR | AGG-CTG-GCT-GAT-ACA-CGG-AGT-AA | ||
| 17 SFG-F | 17 kDa | GCT-CTTGCA-ACT-TCT-ATG-TT | 431 |
| 17 SFG-R | CAT-TGT-TCG-TCA-GGT-TGG-CG | ||
| SFG-CS-F | TGC-CAA-ATG-TTC-ACG-GTA-CTT-T | 74 | |
| SFG-CSR | CAC-AAT-GGA-AAG-AAA-TGC-ACG-A | ||
| SFG-CS-P | TGC-AAT-AGC-AAG-AAC-CGT-AGG-CTG-GAT-G | probe |