Literature DB >> 20684703

Diversity of rotavirus VP7 and VP4 genotypes in Northwestern Nigeria.

M Aminu1, N A Page, A A Ahmad, J U Umoh, J Dewar, A D Steele.   

Abstract

BACKGROUND: Nigeria has recently been ranked third among the 10 countries with the greatest number of rotavirus disease-associated deaths per year. Estimates attribute up to 33,000 deaths annually to rotavirus disease in Nigerian children <5 years old. Although the introduction of the new oral, live attenuated rotavirus vaccines may not occur for another 4-6 years in developing countries, background data on burden of disease, cost of rotavirus disease, and characterization of circulating strains is required to hasten this introduction to children who would clearly benefit from the intervention.
METHODS: Between July 2002 and July 2004, fecal specimens were collected from 869 infants and young children <5 years of age presenting with diarrhea in Kaduna, Kebbi, Sokoto, and Zamfara states in northwestern Nigeria. In addition, 194 control specimens were also collected from children matched for age. Specimens were screened for the presence of rotavirus antigens. Rotavirus-positive specimens were further analyzed to determine electropherotype, subgroup specificity, and G and P genotypes.
RESULTS: Rotavirus was detected in 18% of children with diarrhea and 7.2% of the age-matched case control subjects. The highest rotavirus burden was detected in children aged <6 months. The majority of the rotavirus-positive specimens revealed viruses of long electropherotypes, subgroup II specificity, and G1P[8] genotypes. Furthermore, more than a quarter of specimens (37%) displayed mixed G and P genotypes, and almost a third could not be genotyped.
CONCLUSIONS: The high numbers of mixed rotavirus infections highlight the multitude of enteric pathogens to which children in African countries are exposed. Data on circulating rotavirus strains serve to inform African government officials to the serious health threat posed by rotavirus in their respective countries and to document the diversity of strains before vaccine introduction.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20684703     DOI: 10.1086/653570

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  12 in total

1.  FIRST MOLECULAR DETECTION AND VP7 (G) GENOTYPING OF GROUP A ROTAVIRUS BY SEMI-NESTED RT-PCR FROM SEWAGE IN NIGERIA.

Authors:  Babatunde Olanrewaju Motayo; Adekunle Johnson Adeniji; Adedayo Omotayo Faneye
Journal:  Rev Inst Med Trop Sao Paulo       Date:  2016-11-03       Impact factor: 1.846

2.  Circulation of group A rotaviruses among neonates of human, cow and pig: study from Assam, a north eastern state of India.

Authors:  Rinky Sharma; Durlav Prasad Bora; Paromita Chakraborty; Sushmita Das; Nagendra Nath Barman
Journal:  Indian J Virol       Date:  2013-09-11

3.  Genetic diversity of circulating rotavirus strains in Tanzania prior to the introduction of vaccination.

Authors:  Sabrina J Moyo; Bjørn Blomberg; Kurt Hanevik; Oyvind Kommedal; Kirsti Vainio; Samuel Y Maselle; Nina Langeland
Journal:  PLoS One       Date:  2014-05-20       Impact factor: 3.240

4.  Prevalence and genetic diversity of rotavirus infection in children with acute gastroenteritis in a hospital setting, Nairobi Kenya in post vaccination era: a cross-sectional study.

Authors:  Mary-Theresa Agutu; Julliette Ongus; Janeth Kombich; Rose Kamenwa; James Nyangao; John Kagira; Adelaide Ayoyi Ogutu; Austine Bitek
Journal:  Pan Afr Med J       Date:  2017-01-24

5.  Prevalence of Cryptosporidium parvum, Giardia intestinalis and molecular characterization of group A rotavirus associated with diarrhea in children below five years old in Gaborone, Botswana.

Authors:  Lineage Kurenzvi; Teresa Kibirige Sebunya; Tidimalo Coetzee; Giacomo Maria Paganotti; Mathias Vondee Teye
Journal:  Pan Afr Med J       Date:  2020-10-14

6.  Rotavirus genotypes associated with childhood severe acute diarrhoea in southern Ghana: a cross-sectional study.

Authors:  Christabel C Enweronu-Laryea; Kwamena W Sagoe; Susan Damanka; Belinda Lartey; George E Armah
Journal:  Virol J       Date:  2013-09-14       Impact factor: 4.099

7.  Rotavirus surveillance in Kisangani, the Democratic Republic of the Congo, reveals a high number of unusual genotypes and gene segments of animal origin in non-vaccinated symptomatic children.

Authors:  Elisabeth Heylen; Bibi Batoko Likele; Mark Zeller; Stijn Stevens; Sarah De Coster; Nádia Conceição-Neto; Christel Van Geet; Jan Jacobs; Dauly Ngbonda; Marc Van Ranst; Jelle Matthijnssens
Journal:  PLoS One       Date:  2014-06-26       Impact factor: 3.240

Review 8.  Epidemiology of Rotavirus A in Nigeria: Molecular Diversity and Current Insights.

Authors:  Babatunde Olanrewaju Motayo; Adedayo Omotayo Faneye; Johnson Adekunle Adeniji
Journal:  J Pathog       Date:  2018-10-01

9.  Species A Rotavirus (RVA) Isolated from Sewage in Nigeria, 2014: Close Genetic Relatedness of Partial G, P, and NSP4 Gene Sequences Encoding G1 with Cogent Genes of Other Asian and African Rotaviruses.

Authors:  Babatunde Olanrewaju Motayo; Johnson Adekunle Adeniji; Adedayo Omotayo Faneye
Journal:  J Pathog       Date:  2018-06-24

10.  Isolation and Characterization of Bovine RVA from Northeast China, 2017-2020.

Authors:  Xi Cheng; Wei Wu; Fei Teng; Yue Yan; Guiwei Li; Li Wang; Xiaona Wang; Ruichong Wang; Han Zhou; Yanping Jiang; Wen Cui; Lijie Tang; Yijing Li; Xinyuan Qiao
Journal:  Life (Basel)       Date:  2021-12-11
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.