Literature DB >> 20676731

On the calibration of a size-structured population model from experimental data.

Marie Doumic1, Pedro Maia, Jorge P Zubelli.   

Abstract

The aim of this work is twofold. First, we survey the techniques developed in Perthame and Zubelli (Inverse Probl 23(3):1037-1052, 2007), Doumic et al. (Inverse Probl 25, 2009) to reconstruct the division (birth) rate from the cell volume distribution data in certain structured population structured population models. Secondly, we implement such techniques on experimental cell volume distributions available in the literature so as to validate the theoretical and numerical results. As a proof of concept, we use the experimental data experimental data reported in the classical work of Kubitschek (Biophys J 9(6):792-809, 1969) concerning Escherichia coli in vitro experiments measured by means of a Coulter transducer-multichannel analyzer system (Coulter Electronics, Inc., Hialeah, FL, USA). Despite the rather old measurement technology, the reconstructed division rates still display potentially useful biological features.

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Year:  2010        PMID: 20676731     DOI: 10.1007/s10441-010-9114-9

Source DB:  PubMed          Journal:  Acta Biotheor        ISSN: 0001-5342            Impact factor:   1.774


  4 in total

1.  Estimating the division rate for the growth-fragmentation equation.

Authors:  M Doumic; Léon M Tine
Journal:  J Math Biol       Date:  2012-06-05       Impact factor: 2.259

2.  Numerical rate function determination in partial differential equations modeling cell population dynamics.

Authors:  Andreas Groh; Holger Kohr; Alfred K Louis
Journal:  J Math Biol       Date:  2016-06-13       Impact factor: 2.259

3.  The contribution of age structure to cell population responses to targeted therapeutics.

Authors:  Pierre Gabriel; Shawn P Garbett; Vito Quaranta; Darren R Tyson; Glenn F Webb
Journal:  J Theor Biol       Date:  2012-07-11       Impact factor: 2.691

4.  An efficient kinetic model for assemblies of amyloid fibrils and its application to polyglutamine aggregation.

Authors:  Stéphanie Prigent; Annabelle Ballesta; Frédérique Charles; Natacha Lenuzza; Pierre Gabriel; Léon Matar Tine; Human Rezaei; Marie Doumic
Journal:  PLoS One       Date:  2012-11-13       Impact factor: 3.240

  4 in total

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