Literature DB >> 20675491

A group IIC-type intron interrupts the rRNA methylase gene of Geobacillus stearothermophilus strain 10.

Samuel E Moretz1, Bert C Lampson.   

Abstract

Group IIC introns insert next to the stem-loop structure of rho-independent transcription terminators, thus avoiding intact genes. The insertion sites of 17 copies of the G.st.I1 intron from Geobacillus stearothermophilus were compared. One copy of the intron was found to interrupt an open reading frame (ORF) encoding an rRNA methylase.

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Year:  2010        PMID： 20675491      PMCID： PMC2944541          DOI： 10.1128/JB.00633-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  18 in total

1.  Coevolution of group II intron RNA structures with their intron-encoded reverse transcriptases.

Authors:  N Toor; G Hausner; S Zimmerly
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

2.  Binding of a group II intron-encoded reverse transcriptase/maturase to its high affinity intron RNA binding site involves sequence-specific recognition and autoregulates translation.

Authors:  Ravindra N Singh; Roland J Saldanha; Lisa M D'Souza; Alan M Lambowitz
Journal:  J Mol Biol       Date:  2002-04-26       Impact factor: 5.469

Review 3.  Mobile group II introns.

Authors:  Alan M Lambowitz; Steven Zimmerly
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

4.  A group II intron-type open reading frame from the thermophile Bacillus (Geobacillus) stearothermophilus encodes a heat-stable reverse transcriptase.

Authors:  Jaishree Vellore; Samuel E Moretz; Bert C Lampson
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

5.  Housekeeping recA gene interrupted by group II intron in the thermophilic Geobacillus kaustophilus.

Authors:  Gab-Joo Chee; Hideto Takami
Journal:  Gene       Date:  2005-10-19       Impact factor: 3.688

Review 6.  Retrons, msDNA, and the bacterial genome.

Authors:  B C Lampson; M Inouye; S Inouye
Journal:  Cytogenet Genome Res       Date:  2005       Impact factor: 1.636

7.  Recruitment of host functions suggests a repair pathway for late steps in group II intron retrohoming.

Authors:  Dorie Smith; Jin Zhong; Manabu Matsuura; Alan M Lambowitz; Marlene Belfort
Journal:  Genes Dev       Date:  2005-10-15       Impact factor: 11.361

8.  Group IIC intron mobility into attC sites involves a bulged DNA stem-loop motif.

Authors:  Grégory Léon; Paul H Roy
Journal:  RNA       Date:  2009-06-09       Impact factor: 4.942

Review 9.  The architectural organization and mechanistic function of group II intron structural elements.

Authors:  P Z Qin; A M Pyle
Journal:  Curr Opin Struct Biol       Date:  1998-06       Impact factor: 6.809

10.  Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus.

Authors:  Hideto Takami; Yoshihiro Takaki; Gab-Joo Chee; Shinro Nishi; Shigeru Shimamura; Hiroko Suzuki; Satomi Matsui; Ikuo Uchiyama
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971
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  3 in total

1.  A Highly Proliferative Group IIC Intron from Geobacillus stearothermophilus Reveals New Features of Group II Intron Mobility and Splicing.

Authors:  Georg Mohr; Sean Yoon-Seo Kang; Seung Kuk Park; Yidan Qin; Jacob Grohman; Jun Yao; Jennifer L Stamos; Alan M Lambowitz
Journal:  J Mol Biol       Date:  2018-06-15       Impact factor: 5.469

2.  Thermostable group II intron reverse transcriptase fusion proteins and their use in cDNA synthesis and next-generation RNA sequencing.

Authors:  Sabine Mohr; Eman Ghanem; Whitney Smith; Dennis Sheeter; Yidan Qin; Olga King; Damon Polioudakis; Vishwanath R Iyer; Scott Hunicke-Smith; Sajani Swamy; Scott Kuersten; Alan M Lambowitz
Journal:  RNA       Date:  2013-05-22       Impact factor: 4.942

3.  Architectures and complex functions of tandem riboswitches.

Authors:  Madeline E Sherlock; Gadareth Higgs; Diane Yu; Danielle L Widner; Neil A White; Narasimhan Sudarsan; Harini Sadeeshkumar; Kevin R Perkins; Gayan Mirihana Arachchilage; Sarah N Malkowski; Christopher G King; Kimberly A Harris; Glenn Gaffield; Ruben M Atilho; Ronald R Breaker
Journal:  RNA Biol       Date:  2022-01       Impact factor: 4.766
  3 in total

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