Literature DB >> 20675440

Primorskyibacter sedentarius gen. nov., sp. nov., a novel member of the class Alphaproteobacteria from shallow marine sediments.

Lyudmila A Romanenko1, Naoto Tanaka2, Vasily I Svetashev3, Valery V Mikhailov1.   

Abstract

Two gram-negative, aerobic, non-pigmented, non-motile, rod-shaped bacteria, strains KMM 9015 and KMM 9018(T), were isolated from a sample of shallow sediment collected from the Sea of Japan. An analysis of the nearly complete 16S rRNA gene sequences showed that the isolates were very close to each other phylogenetically (99.9 % sequence similarity) and their close relatives were Marinovum algicola FF3(T) (95.8 and 95.9 %, respectively) and members of the genera Leisingera (95.7-95.1 and 95.8-95.2 %), Phaeobacter (95.0-94.2 and 95.1-94.2 %) and Thalassobius (96.3-94.8 and 96.2-94.7 %) of the class Alphaproteobacteria. In phylogenetic trees based on 16S rRNA gene sequences, strains KMM 9015 and KMM 9018(T) were positioned as a distinct phylogenetic line adjacent to Marinovum algicola. The major isoprenoid quinone was Q-10, the polar lipids consisted of phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and an unknown lipid and the major fatty acid was C(18 : 1)ω7c, followed by 11-methyl C(18 : 1)ω7c, in both strains. The DNA G+C contents of strains KMM 9015 and KMM 9018(T) were 60.2 and 61.9 mol%, respectively. Based on distinctive phenotypic characteristics and phylogenetic analysis, strains KMM 9015 and KMM 9018(T) represent a novel species in a novel genus, for which the name Primorskyibacter sedentarius gen. nov., sp. nov. is proposed. The type strain of Primorskyibacter sedentarius is strain KMM 9018(T) ( = NRIC 0784(T)  = JCM 16874(T)).

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Year:  2010        PMID: 20675440     DOI: 10.1099/ijs.0.025551-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Vadicella arenosi gen. nov., sp. nov., a novel member of the class Alphaproteobacteria isolated from sandy sediments from the Sea of Japan seashore.

Authors:  Lyudmila A Romanenko; Naoto Tanaka; Vasily I Svetashev; Valery V Mikhailov
Journal:  Curr Microbiol       Date:  2010-10-26       Impact factor: 2.188

2.  Roseobacters in a Sea of Poly- and Paraphyly: Whole Genome-Based Taxonomy of the Family Rhodobacteraceae and the Proposal for the Split of the "Roseobacter Clade" Into a Novel Family, Roseobacteraceae fam. nov.

Authors:  Kevin Y H Liang; Fabini D Orata; Yann F Boucher; Rebecca J Case
Journal:  Front Microbiol       Date:  2021-06-25       Impact factor: 5.640

  2 in total

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