Literature DB >> 20670939

Modulation of integrin activation by an entropic spring in the {beta}-knee.

Benoit J Smagghe1, Po-Ssu Huang, Yih-En Andrew Ban, David Baker, Timothy A Springer.   

Abstract

We show that the length of a loop in the β-knee, between the first and second cysteines (C1-C2) in integrin EGF-like (I-EGF) domain 2, modulates integrin activation. Three independent sets of mutants, including swaps among different integrin β-subunits, show that C1-C2 loop lengths of 12 and longer favor the low affinity state and masking of ligand-induced binding site (LIBS) epitopes. Shortening length from 12 to 4 residues progressively increases ligand binding and LIBS epitope exposure. Compared with length, the loop sequence had a smaller effect, which was ascribable to stabilizing loop conformation, and not interactions with the α-subunit. The data together with structural calculations support the concept that the C1-C2 loop is an entropic spring and an emerging theme that disordered regions can regulate allostery. Diversity in the length of this loop may have evolved among integrin β-subunits to adjust the equilibrium between the bent and extended conformations at different set points.

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Year:  2010        PMID: 20670939      PMCID: PMC2963379          DOI: 10.1074/jbc.M110.145177

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  49 in total

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Review 3.  Linking integrin conformation to function.

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4.  Structure of integrin alpha5beta1 in complex with fibronectin.

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  23 in total

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Journal:  J Biol Chem       Date:  2011-09-30       Impact factor: 5.157

2.  Unique disulfide bonds in epidermal growth factor (EGF) domains of β3 affect structure and function of αIIbβ3 and αvβ3 integrins in different manner.

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3.  From sequence and forces to structure, function, and evolution of intrinsically disordered proteins.

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4.  Intact alphaIIbbeta3 integrin is extended after activation as measured by solution X-ray scattering and electron microscopy.

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5.  Multi-scale ensemble modeling of modular proteins with intrinsically disordered linker regions: application to p53.

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7.  The RGD finger of Del-1 is a unique structural feature critical for integrin binding.

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