Literature DB >> 20670684

Spatial HARDI: improved visualization of complex white matter architecture with Bayesian spatial regularization.

Ashish Raj1, Christopher Hess, Pratik Mukherjee.   

Abstract

Imaging of water diffusion using magnetic resonance imaging has become an important noninvasive method for probing the white matter connectivity of the human brain for scientific and clinical studies. Current methods, such as diffusion tensor imaging (DTI), high angular resolution diffusion imaging (HARDI) such as q-ball imaging, and diffusion spectrum imaging (DSI), are limited by low spatial resolution, long scan times, and low signal-to-noise ratio (SNR). These methods fundamentally perform reconstruction on a voxel-by-voxel level, effectively discarding the natural coherence of the data at different points in space. This paper attempts to overcome these tradeoffs by using spatial information to constrain the reconstruction from raw diffusion MRI data, and thereby improve angular resolution and noise tolerance. Spatial constraints are specified in terms of a prior probability distribution, which is then incorporated in a Bayesian reconstruction formulation. By taking the log of the resulting posterior distribution, optimal Bayesian reconstruction is reduced to a cost minimization problem. The minimization is solved using a new iterative algorithm based on successive least squares quadratic descent. Simulation studies and in vivo results are presented which indicate significant gains in terms of higher angular resolution of diffusion orientation distribution functions, better separation of crossing fibers, and improved reconstruction SNR over the same HARDI method, spherical harmonic q-ball imaging, without spatial regularization. Preliminary data also indicate that the proposed method might be better at maintaining accurate ODFs for smaller numbers of diffusion-weighted acquisition directions (hence faster scans) compared to conventional methods. Possible impacts of this work include improved evaluation of white matter microstructural integrity in regions of crossing fibers and higher spatial and angular resolution for more accurate tractography.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20670684      PMCID: PMC2962674          DOI: 10.1016/j.neuroimage.2010.07.040

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  34 in total

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2.  Flow-based fiber tracking with diffusion tensor and q-ball data: validation and comparison to principal diffusion direction techniques.

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4.  Q-ball reconstruction of multimodal fiber orientations using the spherical harmonic basis.

Authors:  Christopher P Hess; Pratik Mukherjee; Eric T Han; Duan Xu; Daniel B Vigneron
Journal:  Magn Reson Med       Date:  2006-07       Impact factor: 4.668

5.  An objective method for regularization of fiber orientation distributions derived from diffusion-weighted MRI.

Authors:  Ken E Sakaie; Mark J Lowe
Journal:  Neuroimage       Date:  2006-10-09       Impact factor: 6.556

6.  A novel tensor distribution model for the diffusion-weighted MR signal.

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7.  Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT).

Authors:  Evren Ozarslan; Timothy M Shepherd; Baba C Vemuri; Stephen J Blackband; Thomas H Mareci
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8.  Regularized, fast, and robust analytical Q-ball imaging.

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9.  Q-ball imaging of macaque white matter architecture.

Authors:  David S Tuch; Jonathan J Wisco; Mark H Khachaturian; Leeland B Ekstrom; Rolf Kötter; Wim Vanduffel
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  11 in total

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2.  Improved diffusion imaging through SNR-enhancing joint reconstruction.

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3.  Neurological imaging: statistics behind the pictures.

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Journal:  Imaging Med       Date:  2011-08-01

4.  Greedy Algorithms for Nonnegativity-Constrained Simultaneous Sparse Recovery.

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Journal:  Signal Processing       Date:  2016-02-06       Impact factor: 4.662

5.  Extended Broca's area in the functional connectome of language in adults: combined cortical and subcortical single-subject analysis using fMRI and DTI tractography.

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Journal:  Brain Topogr       Date:  2012-09-22       Impact factor: 3.020

6.  Repeatability and variation of region-of-interest methods using quantitative diffusion tensor MR imaging of the brain.

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Journal:  BMC Med Imaging       Date:  2012-10-11       Impact factor: 1.930

Review 7.  Searching for novel biomarkers using high resolution diffusion tensor imaging.

Authors:  Michael A Yassa
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8.  Differential development of human brain white matter tracts.

Authors:  Davide Imperati; Stan Colcombe; Clare Kelly; Adriana Di Martino; Juan Zhou; F Xavier Castellanos; Michael P Milham
Journal:  PLoS One       Date:  2011-08-31       Impact factor: 3.240

9.  Multi-compartment T2 relaxometry using a spatially constrained multi-Gaussian model.

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10.  The application of a mathematical model linking structural and functional connectomes in severe brain injury.

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Journal:  Neuroimage Clin       Date:  2016-04-14       Impact factor: 4.881

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