Literature DB >> 20659017

Inhibition of translation initiation following glucose depletion in yeast facilitates a rationalization of mRNA content.

Jennifer Lui1, Susan G Campbell, Mark P Ashe.   

Abstract

Glucose is the preferred carbon source for most eukaryotes and so it is important that cells can sense and react rapidly to fluctuations in glucose levels. It is becoming increasingly clear that the regulation of gene expression at the post-transcriptional level is important in the adaptation to changes in glucose levels, possibly as this could engender more rapid alterations in the concentrations of key proteins, such as metabolic enzymes. Following the removal of glucose from yeast cells a rapid inhibition of translation is observed. As a consequence, mRNPs (messenger ribonucleoproteins) relocalize into cytoplasmic granules known as P-bodies (processing bodies) and EGP-bodies. mRNA decay components localize into P-bodies, and thus these assemblies are likely to represent sites where mRNAs are targeted for degradation. In contrast, EGP-bodies lack any decay components and contain the eukaryotic translation initiation factors eIF4E, eIF4G and Pab1p, as well as other RNA-binding proteins. Therefore EGP-bodies probably constitute sites where mRNAs are earmarked for storage. So, it is possible that cells distinguish between transcripts and target them to either P-bodies or EGP-bodies depending on their functional value. The localization of mRNAs into these granules following glucose starvation may serve to preserve mRNAs that are involved in the diauxic shift to ethanol growth and entry into stationary phase, as well as to degrade mRNAs that are solely involved in glucose fermentation.

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Year:  2010        PMID: 20659017     DOI: 10.1042/BST0381131

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  13 in total

1.  The cAMP-dependent protein kinase signaling pathway is a key regulator of P body foci formation.

Authors:  Vidhya Ramachandran; Khyati H Shah; Paul K Herman
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

2.  PKA isoforms coordinate mRNA fate during nutrient starvation.

Authors:  Vanesa Tudisca; Clare Simpson; Lydia Castelli; Jennifer Lui; Nathaniel Hoyle; Silvia Moreno; Mark Ashe; Paula Portela
Journal:  J Cell Sci       Date:  2012-08-16       Impact factor: 5.285

3.  Glucose depletion inhibits translation initiation via eIF4A loss and subsequent 48S preinitiation complex accumulation, while the pentose phosphate pathway is coordinately up-regulated.

Authors:  Lydia M Castelli; Jennifer Lui; Susan G Campbell; William Rowe; Leo A H Zeef; Leah E A Holmes; Nathaniel P Hoyle; Jonathon Bone; Julian N Selley; Paul F G Sims; Mark P Ashe
Journal:  Mol Biol Cell       Date:  2011-07-27       Impact factor: 4.138

4.  Pub1p C-terminal RRM domain interacts with Tif4631p through a conserved region neighbouring the Pab1p binding site.

Authors:  Clara M Santiveri; Yasmina Mirassou; Palma Rico-Lastres; Santiago Martínez-Lumbreras; José Manuel Pérez-Cañadillas
Journal:  PLoS One       Date:  2011-09-08       Impact factor: 3.240

5.  Yeast mRNA cap-binding protein Cbc1/Sto1 is necessary for the rapid reprogramming of translation after hyperosmotic shock.

Authors:  Elena Garre; Lorena Romero-Santacreu; Nikki De Clercq; Nati Blasco-Angulo; Per Sunnerhagen; Paula Alepuz
Journal:  Mol Biol Cell       Date:  2011-11-09       Impact factor: 4.138

6.  Regulation of conditional gene expression by coupled transcription repression and RNA degradation.

Authors:  Mathieu Lavoie; Dongling Ge; Sherif Abou Elela
Journal:  Nucleic Acids Res       Date:  2011-09-20       Impact factor: 16.971

7.  Reg1 and Snf1 regulate stress-induced relocalization of protein phosphatase-1 to cytoplasmic granules.

Authors:  Helena Maria Schnell; Marco Jochem; Yagmur Micoogullari; Claire Louise Riggs; Pavel Ivanov; Hendrik Welsch; Rini Ravindran; Paul Anderson; Lucy Christina Robinson; Kelly Tatchell; John Hanna
Journal:  FEBS J       Date:  2021-03-26       Impact factor: 5.622

8.  Proteomic Analysis of Dhh1 Complexes Reveals a Role for Hsp40 Chaperone Ydj1 in Yeast P-Body Assembly.

Authors:  Gregory A Cary; Dani B N Vinh; Patrick May; Rolf Kuestner; Aimée M Dudley
Journal:  G3 (Bethesda)       Date:  2015-09-21       Impact factor: 3.154

9.  mRNA localization to P-bodies in yeast is bi-phasic with many mRNAs captured in a late Bfr1p-dependent wave.

Authors:  Clare E Simpson; Jennifer Lui; Christopher J Kershaw; Paul F G Sims; Mark P Ashe
Journal:  J Cell Sci       Date:  2014-01-14       Impact factor: 5.285

Review 10.  The yeast deletion collection: a decade of functional genomics.

Authors:  Guri Giaever; Corey Nislow
Journal:  Genetics       Date:  2014-06-17       Impact factor: 4.562

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