Literature DB >> 20658269

Multivariate data analysis for neuroimaging data: overview and application to Alzheimer's disease.

Christian Habeck1, Yaakov Stern.   

Abstract

As clinical and cognitive neuroscience mature, the need for sophisticated neuroimaging analysis becomes more apparent. Multivariate analysis techniques have recently received increasing attention as they have many attractive features that cannot be easily realized by the more commonly used univariate, voxel-wise, techniques. Multivariate approaches evaluate correlation/covariance of activation across brain regions, rather than proceeding on a voxel-by-voxel basis. Thus, their results can be more easily interpreted as a signature of neural networks. Univariate approaches, on the other hand, cannot directly address functional connectivity in the brain. The covariance approach can also result in greater statistical power when compared with univariate techniques, which are forced to employ very stringent, and often overly conservative, corrections for voxel-wise multiple comparisons. Multivariate techniques also lend themselves much better to prospective application of results from the analysis of one dataset to entirely new datasets. Multivariate techniques are thus well placed to provide information about mean differences and correlations with behavior, similarly to univariate approaches, with potentially greater statistical power and better reproducibility checks. In contrast to these advantages is the high barrier of entry to the use of multivariate approaches, preventing more widespread application in the community. To the neuroscientist becoming familiar with multivariate analysis techniques, an initial survey of the field might present a bewildering variety of approaches that, although algorithmically similar, are presented with different emphases, typically by people with mathematics backgrounds. We believe that multivariate analysis techniques have sufficient potential to warrant better dissemination. Researchers should be able to employ them in an informed and accessible manner. The following article attempts to provide a basic introduction with sample applications to simulated and real-world data sets.

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Mesh:

Year:  2010        PMID: 20658269      PMCID: PMC3001346          DOI: 10.1007/s12013-010-9093-0

Source DB:  PubMed          Journal:  Cell Biochem Biophys        ISSN: 1085-9195            Impact factor:   2.194


  30 in total

1.  Tensorial extensions of independent component analysis for multisubject FMRI analysis.

Authors:  C F Beckmann; S M Smith
Journal:  Neuroimage       Date:  2005-01-08       Impact factor: 6.556

2.  Independent component analysis: an introduction.

Authors:  James V Stone
Journal:  Trends Cogn Sci       Date:  2002-02-01       Impact factor: 20.229

3.  Background learning for robust face recognition with PCA in the presence of clutter.

Authors:  A N Rajagopalan; Rama Chellappa; Nathan T Koterba
Journal:  IEEE Trans Image Process       Date:  2005-06       Impact factor: 10.856

Review 4.  Theoretical, statistical, and practical perspectives on pattern-based classification approaches to the analysis of functional neuroimaging data.

Authors:  Alice J O'Toole; Fang Jiang; Hervé Abdi; Nils Pénard; Joseph P Dunlop; Marc A Parent
Journal:  J Cogn Neurosci       Date:  2007-11       Impact factor: 3.225

5.  Multivariate and univariate neuroimaging biomarkers of Alzheimer's disease.

Authors:  Christian Habeck; Norman L Foster; Robert Perneczky; Alexander Kurz; Panagiotis Alexopoulos; Robert A Koeppe; Alexander Drzezga; Yaakov Stern
Journal:  Neuroimage       Date:  2008-02-14       Impact factor: 6.556

6.  An introduction to anatomical ROI-based fMRI classification analysis.

Authors:  Joset A Etzel; Valeria Gazzola; Christian Keysers
Journal:  Brain Res       Date:  2009-06-06       Impact factor: 3.252

7.  Combining multivariate voxel selection and support vector machines for mapping and classification of fMRI spatial patterns.

Authors:  Federico De Martino; Giancarlo Valente; Noël Staeren; John Ashburner; Rainer Goebel; Elia Formisano
Journal:  Neuroimage       Date:  2008-07-11       Impact factor: 6.556

8.  A multivariate analysis of age-related differences in default mode and task-positive networks across multiple cognitive domains.

Authors:  Cheryl L Grady; Andrea B Protzner; Natasa Kovacevic; Stephen C Strother; Babak Afshin-Pour; Magda Wojtowicz; John A E Anderson; Nathan Churchill; Anthony R McIntosh
Journal:  Cereb Cortex       Date:  2009-09-29       Impact factor: 5.357

9.  Scaled subprofile model: a statistical approach to the analysis of functional patterns in positron emission tomographic data.

Authors:  J R Moeller; S C Strother; J J Sidtis; D A Rottenberg
Journal:  J Cereb Blood Flow Metab       Date:  1987-10       Impact factor: 6.200

10.  Age-related networks of regional covariance in MRI gray matter: reproducible multivariate patterns in healthy aging.

Authors:  Kaitlin L Bergfield; Krista D Hanson; Kewei Chen; Stefan J Teipel; Harald Hampel; Stanley I Rapoport; James R Moeller; Gene E Alexander
Journal:  Neuroimage       Date:  2009-09-28       Impact factor: 6.556

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  62 in total

Review 1.  The Alzheimer's Disease Neuroimaging Initiative: a review of papers published since its inception.

Authors:  Michael W Weiner; Dallas P Veitch; Paul S Aisen; Laurel A Beckett; Nigel J Cairns; Robert C Green; Danielle Harvey; Clifford R Jack; William Jagust; Enchi Liu; John C Morris; Ronald C Petersen; Andrew J Saykin; Mark E Schmidt; Leslie Shaw; Judith A Siuciak; Holly Soares; Arthur W Toga; John Q Trojanowski
Journal:  Alzheimers Dement       Date:  2011-11-02       Impact factor: 21.566

2.  Abnormal metabolic brain networks in a nonhuman primate model of parkinsonism.

Authors:  Yilong Ma; Shichun Peng; Phoebe G Spetsieris; Vesna Sossi; David Eidelberg; Doris J Doudet
Journal:  J Cereb Blood Flow Metab       Date:  2011-11-30       Impact factor: 6.200

3.  White matter tract covariance patterns predict age-declining cognitive abilities.

Authors:  Yunglin Gazes; F DuBois Bowman; Qolamreza R Razlighi; Deirdre O'Shea; Yaakov Stern; Christian Habeck
Journal:  Neuroimage       Date:  2015-10-19       Impact factor: 6.556

4.  Network Structure and Function in Parkinson's Disease.

Authors:  Ji Hyun Ko; Phoebe G Spetsieris; David Eidelberg
Journal:  Cereb Cortex       Date:  2018-12-01       Impact factor: 5.357

5.  Connectome mapping with edge density imaging differentiates pediatric mild traumatic brain injury from typically developing controls: proof of concept.

Authors:  Cyrus A Raji; Maxwell B Wang; NhuNhu Nguyen; Julia P Owen; Eva M Palacios; Esther L Yuh; Pratik Mukherjee
Journal:  Pediatr Radiol       Date:  2020-06-30

6.  Gray Matter Volume Covariance Networks, Social Support, and Cognition in Older Adults.

Authors:  Kelly Cotton; Joe Verghese; Helena M Blumen
Journal:  J Gerontol B Psychol Sci Soc Sci       Date:  2020-06-02       Impact factor: 4.077

7.  Disruption of network for visual perception of natural motion in primary dystonia.

Authors:  Koji Fujita; Wataru Sako; An Vo; Susan B Bressman; David Eidelberg
Journal:  Hum Brain Mapp       Date:  2017-12-06       Impact factor: 5.038

8.  Structural covariance of the default network in healthy and pathological aging.

Authors:  R Nathan Spreng; Gary R Turner
Journal:  J Neurosci       Date:  2013-09-18       Impact factor: 6.167

9.  Multivariate classification of patients with Alzheimer's and dementia with Lewy bodies using high-dimensional cortical thickness measurements: an MRI surface-based morphometric study.

Authors:  Alexander V Lebedev; E Westman; M K Beyer; M G Kramberger; C Aguilar; Z Pirtosek; D Aarsland
Journal:  J Neurol       Date:  2012-12-08       Impact factor: 4.849

10.  Covarying alterations in Aβ deposition, glucose metabolism, and gray matter volume in cognitively normal elderly.

Authors:  Hwamee Oh; Christian Habeck; Cindee Madison; William Jagust
Journal:  Hum Brain Mapp       Date:  2012-09-11       Impact factor: 5.038

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