Literature DB >> 20656812

Cesiribacter andamanensis gen. nov., sp. nov., isolated from a soil sample from a mud volcano.

T N R Srinivas1, P Anil Kumar1, S Madhu1, B Sunil1, T V R S Sharma2, S Shivaji1.   

Abstract

A novel gram-staining-negative, rod-shaped, non-motile bacterium, strain AMV16(T), was isolated from a soil sample collected from a mud volcano located in the Andaman Islands, India. The cell suspension was pale orange. Cells of strain AMV16(T) were positive for catalase, oxidase, lipase, ornithine decarboxylase and lysine decarboxylase and negative for gelatinase and urease. The fatty acids present were anteiso-C(11 : 0) (5.4 %), anteiso-C(12 : 0) (4.1 %), C(12 : 0) (7.0 %), iso-C(15 : 0) (14.4 %), anteiso-C(15 : 0) (3.4 %), anteiso-C(16 : 0) (3.0 %), C(16 : 0) (2.6 %), anteiso-C(17 : 0) (3.7 %), iso-C(19 : 0) (9.7 %), C(13 : 1) (13.8 %), iso-C(15 : 1) G (15.9 %), iso-C(16 : 1) G (11.1 %) and summed feature 5 (anteiso-C(18 : 0) and/or C(18 : 2)ω6,9c; 5.9 %). Strain AMV16(T) contained MK-4 is [corrected] the major respiratory quinone and diphosphatidylglycerol and phosphatidylethanolamine made up the phospholipids. The G+C content of DNA of strain AMV16(T) was 50.9 mol%. blast sequence similarity searches based on the 16S rRNA gene sequence indicated that species of the genus Marivirga were the nearest phylogenetic neighbours, with pairwise sequence similarity ranging from 89.9 to 90.0 %. Phylogenetic analyses indicated that strain AMV16(T) clustered with the type strains of Marivirga tractuosa and Marivirga sericea at a phylogenetic distance of 14.6 % (85.4 % similarity), distinct from clades representing other genera of the family 'Flammeovirgaceae'. Based on the above-mentioned phenotypic and phylogenetic characteristics, strain AMV16(T) is proposed as a representative of a new genus and novel species, Cesiribacter andamanensis gen. nov., sp. nov. The type strain of Cesiribacter andamanensis is AMV16(T) ( = DSM 22818(T)  = CCUG 58431(T)).

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Year:  2010        PMID: 20656812     DOI: 10.1099/ijs.0.025429-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

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3.  Algivirga pacifica gen. nov., sp. nov., a novel agar-degrading marine bacterium of the family Flammeovirgaceae isolated from Micronesia.

Authors:  Jennifer Jooyoun Kim; Ji Hyung Kim; Young-Kyung Kwon; Kae Kyoung Kwon; Sung-Hyun Yang; Jiyi Jang; Soo-Jin Heo; Heung-Sik Park; Won-Kyo Jung; Youngdeuk Lee; Do-Hyung Kang; Chulhong Oh
Journal:  Curr Microbiol       Date:  2013-08-02       Impact factor: 2.188

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Authors:  Eun Ju Choi; Deanna S Beatty; Lauren A Paul; William Fenical; Paul R Jensen
Journal:  Int J Syst Evol Microbiol       Date:  2012-06-29       Impact factor: 2.747

5.  Complete genome sequence of Marivirga tractuosa type strain (H-43).

Authors:  Ioanna Pagani; Olga Chertkov; Alla Lapidus; Susan Lucas; Tijana Glavina Del Rio; Hope Tice; Alex Copeland; Jan-Fang Cheng; Matt Nolan; Elizabeth Saunders; Sam Pitluck; Brittany Held; Lynne Goodwin; Konstantinos Liolios; Galina Ovchinikova; Natalia Ivanova; Konstantinos Mavromatis; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Cynthia D Jeffries; John C Detter; Cliff Han; Roxanne Tapia; Olivier D Ngatchou-Djao; Manfred Rohde; Markus Göker; Stefan Spring; Johannes Sikorski; Tanja Woyke; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2011-04-29

6.  Draft Genome Sequence of Cesiribacter andamanensis Strain AMV16T, Isolated from a Soil Sample from a Mud Volcano in the Andaman Islands, India.

Authors:  Sisinthy Shivaji; Sreenivas Ara; Zareena Begum; T N R Srinivas; Aditya Singh; Anil Kumar Pinnaka
Journal:  Genome Announc       Date:  2013-05-16

7.  Extracellular polysaccharide production by a novel osmotolerant marine strain of Alteromonas macleodii and its application towards biomineralization of silver.

Authors:  Ananya Mehta; Chandni Sidhu; Anil Kumar Pinnaka; Anirban Roy Choudhury
Journal:  PLoS One       Date:  2014-06-16       Impact factor: 3.240

  7 in total

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