Literature DB >> 20655834

Photosynthetic vesicle architecture and constraints on efficient energy harvesting.

Melih Sener1, Johan Strümpfer, John A Timney, Arvi Freiberg, C Neil Hunter, Klaus Schulten.   

Abstract

Photosynthetic chromatophore vesicles found in some purple bacteria constitute one of the simplest light-harvesting systems in nature. The overall architecture of chromatophore vesicles and the structural integration of vesicle function remain poorly understood despite structural information being available on individual constituent proteins. An all-atom structural model for an entire chromatophore vesicle is presented, which improves upon earlier models by taking into account the stoichiometry of core and antenna complexes determined by the absorption spectrum of intact vesicles in Rhodobacter sphaeroides, as well as the well-established curvature-inducing properties of the dimeric core complex. The absorption spectrum of low-light-adapted vesicles is shown to correspond to a light-harvesting-complex 2 to reaction center ratio of 3:1. A structural model for a vesicle consistent with this stoichiometry is developed and used in the computation of excitonic properties. Considered also is the packing density of antenna and core complexes that is high enough for efficient energy transfer and low enough for quinone diffusion from reaction centers to cytochrome bc(1) complexes. Copyright 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20655834      PMCID: PMC2895385          DOI: 10.1016/j.bpj.2010.04.013

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

1.  The solution structure of Rhodobacter sphaeroides LH1beta reveals two helical domains separated by a more flexible region: structural consequences for the LH1 complex.

Authors:  M J Conroy; W H Westerhuis; P S Parkes-Loach; P A Loach; C N Hunter; M P Williamson
Journal:  J Mol Biol       Date:  2000-04-21       Impact factor: 5.469

2.  Molecular evidence for the early evolution of photosynthesis.

Authors:  J Xiong; W M Fischer; K Inoue; M Nakahara; C E Bauer
Journal:  Science       Date:  2000-09-08       Impact factor: 47.728

3.  Watching the photosynthetic apparatus in native membranes.

Authors:  Simon Scheuring; James N Sturgis; Valerie Prima; Alain Bernadac; Daniel Lévy; Jean-Louis Rigaud
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-23       Impact factor: 11.205

4.  Light harvesting complex II B850 excitation dynamics.

Authors:  Johan Strümpfer; Klaus Schulten
Journal:  J Chem Phys       Date:  2009-12-14       Impact factor: 3.488

Review 5.  ATP synthase: an electrochemical transducer with rotatory mechanics.

Authors:  W Junge; H Lill; S Engelbrecht
Journal:  Trends Biochem Sci       Date:  1997-11       Impact factor: 13.807

6.  General random matrix approach to account for the effect of static disorder on the spectral properties of light harvesting systems.

Authors:  Melih K Sener; Klaus Schulten
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-03-06

7.  Predicting the structure of the light-harvesting complex II of Rhodospirillum molischianum.

Authors:  X Hu; D Xu; K Hamer; K Schulten; J Koepke; H Michel
Journal:  Protein Sci       Date:  1995-09       Impact factor: 6.725

8.  Energy transfer in the inhomogeneously broadened core antenna of purple bacteria: a simultaneous fit of low-intensity picosecond absorption and fluorescence kinetics.

Authors:  T Pullerits; K J Visscher; S Hess; V Sundström; A Freiberg; K Timpmann; R van Grondelle
Journal:  Biophys J       Date:  1994-01       Impact factor: 4.033

9.  Dynamics and diffusion in photosynthetic membranes from rhodospirillum photometricum.

Authors:  Simon Scheuring; James N Sturgis
Journal:  Biophys J       Date:  2006-09-01       Impact factor: 4.033

Review 10.  Coupling H(+) transport to rotary catalysis in F-type ATP synthases: structure and organization of the transmembrane rotary motor.

Authors:  R H Fillingame; W Jiang; O Y Dmitriev
Journal:  J Exp Biol       Date:  2000-01       Impact factor: 3.312

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  19 in total

1.  Excited state dynamics in photosynthetic reaction center and light harvesting complex 1.

Authors:  Johan Strümpfer; Klaus Schulten
Journal:  J Chem Phys       Date:  2012-08-14       Impact factor: 3.488

2.  The effect of correlated bath fluctuations on exciton transfer.

Authors:  Johan Strümpfer; Klaus Schulten
Journal:  J Chem Phys       Date:  2011-03-07       Impact factor: 3.488

3.  Large-Scale Molecular Dynamics Simulations of Cellular Compartments.

Authors:  Eric Wilson; John Vant; Jacob Layton; Ryan Boyd; Hyungro Lee; Matteo Turilli; Benjamín Hernández; Sean Wilkinson; Shantenu Jha; Chitrak Gupta; Daipayan Sarkar; Abhishek Singharoy
Journal:  Methods Mol Biol       Date:  2021

4.  Light harvesting by lamellar chromatophores in Rhodospirillum photometricum.

Authors:  Danielle E Chandler; Johan Strümpfer; Melih Sener; Simon Scheuring; Klaus Schulten
Journal:  Biophys J       Date:  2014-06-03       Impact factor: 4.033

Review 5.  Förster energy transfer theory as reflected in the structures of photosynthetic light-harvesting systems.

Authors:  Melih Şener; Johan Strümpfer; Jen Hsin; Danielle Chandler; Simon Scheuring; C Neil Hunter; Klaus Schulten
Journal:  Chemphyschem       Date:  2011-02-25       Impact factor: 3.102

6.  Atoms to Phenotypes: Molecular Design Principles of Cellular Energy Metabolism.

Authors:  Abhishek Singharoy; Christopher Maffeo; Karelia H Delgado-Magnero; David J K Swainsbury; Melih Sener; Ulrich Kleinekathöfer; John W Vant; Jonathan Nguyen; Andrew Hitchcock; Barry Isralewitz; Ivan Teo; Danielle E Chandler; John E Stone; James C Phillips; Taras V Pogorelov; M Ilaria Mallus; Christophe Chipot; Zaida Luthey-Schulten; D Peter Tieleman; C Neil Hunter; Emad Tajkhorshid; Aleksei Aksimentiev; Klaus Schulten
Journal:  Cell       Date:  2019-11-14       Impact factor: 41.582

7.  Quest for spatially correlated fluctuations in the FMO light-harvesting complex.

Authors:  Carsten Olbrich; Johan Strümpfer; Klaus Schulten; Ulrich Kleinekathöfer
Journal:  J Phys Chem B       Date:  2010-12-10       Impact factor: 2.991

8.  Determination of Cell Doubling Times from the Return-on-Investment Time of Photosynthetic Vesicles Based on Atomic Detail Structural Models.

Authors:  Andrew Hitchcock; C Neil Hunter; Melih Sener
Journal:  J Phys Chem B       Date:  2017-03-16       Impact factor: 2.991

9.  How Quantum Coherence Assists Photosynthetic Light Harvesting.

Authors:  J Strümpfer; M Sener; K Schulten
Journal:  J Phys Chem Lett       Date:  2012-01-26       Impact factor: 6.475

10.  Open Quantum Dynamics Calculations with the Hierarchy Equations of Motion on Parallel Computers.

Authors:  Johan Strümpfer; Klaus Schulten
Journal:  J Chem Theory Comput       Date:  2012-06-15       Impact factor: 6.006

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