Literature DB >> 20652505

Sample size and power calculation for molecular biology studies.

Sin-Ho Jung1.   

Abstract

Sample size calculation is a critical procedure when designing a new biological study. In this chapter, we consider molecular biology studies generating huge dimensional data. Microarray studies are typical examples, so that we state this chapter in terms of gene microarray data, but the discussed methods can be used for design and analysis of any molecular biology studies involving high-dimensional data. In this chapter, we discuss sample size calculation methods for molecular biology studies when the discovery of prognostic molecular markers is performed by accurately controlling false discovery rate (FDR) or family-wise error rate (FWER) in the final data analysis. We limit our discussion to the two-sample case.

Mesh:

Year:  2010        PMID: 20652505     DOI: 10.1007/978-1-60761-580-4_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  8 in total

1.  Epigenome-wide association study for transgenerational disease sperm epimutation biomarkers following ancestral exposure to jet fuel hydrocarbons.

Authors:  Millissia Ben Maamar; Eric Nilsson; Jennifer L M Thorson; Daniel Beck; Michael K Skinner
Journal:  Reprod Toxicol       Date:  2020-09-06       Impact factor: 3.143

2.  Restraint of presynaptic protein levels by Wnd/DLK signaling mediates synaptic defects associated with the kinesin-3 motor Unc-104.

Authors:  Jiaxing Li; Yao V Zhang; Elham Asghari Adib; Doychin T Stanchev; Xin Xiong; Susan Klinedinst; Pushpanjali Soppina; Thomas Robert Jahn; Richard I Hume; Tobias M Rasse; Catherine A Collins
Journal:  Elife       Date:  2017-09-19       Impact factor: 8.140

3.  Intra- and inter-individual variance of gene expression in clinical studies.

Authors:  Wei-Chung Cheng; Wun-Yi Shu; Chia-Yang Li; Min-Lung Tsai; Cheng-Wei Chang; Chaang-Ray Chen; Hung-Tsu Cheng; Tzu-Hao Wang; Ian C Hsu
Journal:  PLoS One       Date:  2012-06-18       Impact factor: 3.240

4.  Ancestral plastics exposure induces transgenerational disease-specific sperm epigenome-wide association biomarkers.

Authors:  Jennifer L M Thorson; Daniel Beck; Millissia Ben Maamar; Eric E Nilsson; Michael K Skinner
Journal:  Environ Epigenet       Date:  2021-03-20

5.  Environmental induced transgenerational inheritance impacts systems epigenetics in disease etiology.

Authors:  Daniel Beck; Eric E Nilsson; Millissia Ben Maamar; Michael K Skinner
Journal:  Sci Rep       Date:  2022-04-19       Impact factor: 4.996

6.  The TNF-α -308 Promoter Gene Polymorphism and Chronic HBV Infection.

Authors:  Sirous Tayebi; Ashraf Mohamadkhani
Journal:  Hepat Res Treat       Date:  2012-10-24

7.  Epigenome-wide association study for pesticide (Permethrin and DEET) induced DNA methylation epimutation biomarkers for specific transgenerational disease.

Authors:  Jennifer L M Thorson; Daniel Beck; Millissia Ben Maamar; Eric E Nilsson; Michael K Skinner
Journal:  Environ Health       Date:  2020-11-04       Impact factor: 5.984

8.  Epigenome-wide association study for glyphosate induced transgenerational sperm DNA methylation and histone retention epigenetic biomarkers for disease.

Authors:  Millissia Ben Maamar; Daniel Beck; Eric E Nilsson; Deepika Kubsad; Michael K Skinner
Journal:  Epigenetics       Date:  2020-12-09       Impact factor: 4.528

  8 in total

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