Literature DB >> 20649754

Evaluation of DNA barcoding and identification of new haplomorphs in Canadian deerflies and horseflies.

A Cywinska1, M A Hannan, P G Kevan, R E Roughley, M Iranpour, F F Hunter.   

Abstract

This paper reports the first tests of the suitability of the standardized mitochondrial cytochrome c oxidase subunit I (COI) barcoding system for the identification of Canadian deerflies and horseflies. Two additional mitochondrial molecular markers were used to determine whether unambiguous species recognition in tabanids can be achieved. Our 332 Canadian tabanid samples yielded 650 sequences from five genera and 42 species. Standard COI barcodes demonstrated a strong A + T bias (mean 68.1%), especially at third codon positions (mean 93.0%). Our preliminary test of this system showed that the standard COI barcode worked well for Canadian Tabanidae: the target DNA can be easily recovered from small amounts of insect tissue and aligned for all tabanid taxa. Each tabanid species possessed distinctive sets of COI haplotypes which discriminated well among species. Average conspecific Kimura two-parameter (K2P) divergence (0.49%) was 12 times lower than the average divergence within species. Both the neighbour-joining and the Bayesian methods produced trees with identical monophyletic species groups. Two species, Chrysops dawsoni Philip and Chrysops montanus Osten Sacken (Diptera: Tabanidae), showed relatively deep intraspecific sequence divergences (∼ 10 times the average) for all three mitochondrial gene regions analysed. We suggest provisional differentiation of Ch. montanus into two haplotypes, namely, Ch. montanus haplomorph 1 and Ch. montanus haplomorph 2, both defined by their molecular sequences and by newly discovered differences in structural features near their ocelli.
© 2010 Brock University. Medical and Veterinary Entomology © 2010 The Royal Entomological Society.

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Year:  2010        PMID: 20649754     DOI: 10.1111/j.1365-2915.2010.00896.x

Source DB:  PubMed          Journal:  Med Vet Entomol        ISSN: 0269-283X            Impact factor:   2.739


  5 in total

1.  Using COI gene sequence to barcode two morphologically alike species: the cotton bollworm and the oriental tobacco budworm (Lepidoptera: Noctuidae).

Authors:  Qing-Qing Li; Di-Yan Li; Hui Ye; Xiao-Fei Liu; Wei Shi; Neng Cao; Yan-Qing Duan
Journal:  Mol Biol Rep       Date:  2010-12-23       Impact factor: 2.316

2.  Molecular identification of Saint Louis encephalitis virus genotype IV in Colombia.

Authors:  Richard Hoyos-López; Sandra Uribe Soto; Guillermo Rúa-Uribe; Juan Carlos Gallego-Gómez
Journal:  Mem Inst Oswaldo Cruz       Date:  2015-08-21       Impact factor: 2.743

3.  Morphological re-description and molecular identification of Tabanidae (Diptera) in East Africa.

Authors:  Claire M Mugasa; Jandouwe Villinger; Joseph Gitau; Nelly Ndungu; Daniel Masiga
Journal:  Zookeys       Date:  2018-06-26       Impact factor: 1.546

4.  DNA barcoding of the horsefly fauna (Diptera, Tabanidae) of Croatia with notes on the morphology and taxonomy of selected species from Chrysopsinae and Tabaninae.

Authors:  Stjepan Krčmar; Mladen Kučinić; Marco Pezzi; Branka Bruvo Mađarić
Journal:  Zookeys       Date:  2022-02-23       Impact factor: 1.546

5.  Tabanids as possible pathogen vectors in Senegal (West Africa).

Authors:  Mohamed Lamine Keita; Hacène Medkour; Masse Sambou; Handi Dahmana; Oleg Mediannikov
Journal:  Parasit Vectors       Date:  2020-10-01       Impact factor: 3.876

  5 in total

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