Literature DB >> 20645297

Isomerization of stilbene using enforced geometry optimization.

Jon Baker1, Krzysztof Wolinski.   

Abstract

Using our recently proposed quantum chemical model to simulate the effect of external forces acting on a molecule (Wolinski and Baker, Mol Phys 2009, 107, 2403), which we subsequently termed enforced geometry optimization (EGO), we investigate structural isomerism in C(14) H(12) , starting from cis-stilbene. By applying an external force to pairs of carbon atoms, one from each "half" of the molecule, we have generated 10 different structural isomers. Each was characterized as a minimum by vibrational analysis. Not only can EGO generate potentially new, metastable isomers it can also provide good initial guesses for transition states connecting the starting and final structures, thus giving an estimate of the stability of the new isomers to rearrangement back to the starting material. In addition to the new isomers, we provide a full set of vibrational fundamentals for cis- and trans-stilbene and 4a,4b-dihydrophenanthrene. The agreement with experimental assignments is excellent, with mean average deviations for the stilbenes of 5.0 cm(-1) or less.
Copyright © 2010 Wiley Periodicals, Inc.

Entities:  

Year:  2011        PMID: 20645297     DOI: 10.1002/jcc.21597

Source DB:  PubMed          Journal:  J Comput Chem        ISSN: 0192-8651            Impact factor:   3.376


  3 in total

1.  Implementation and performance of the artificial force induced reaction method in the GRRM17 program.

Authors:  Satoshi Maeda; Yu Harabuchi; Makito Takagi; Kenichiro Saita; Kimichi Suzuki; Tomoya Ichino; Yosuke Sumiya; Kanami Sugiyama; Yuriko Ono
Journal:  J Comput Chem       Date:  2017-11-14       Impact factor: 3.376

Review 2.  A Trajectory-Based Method to Explore Reaction Mechanisms.

Authors:  Saulo A Vázquez; Xose L Otero; Emilio Martinez-Nunez
Journal:  Molecules       Date:  2018-11-30       Impact factor: 4.411

3.  Simulation of force spectroscopy experiments on galacturonic acid oligomers.

Authors:  Justyna Cybulska; Agnieszka Brzyska; Artur Zdunek; Krzysztof Woliński
Journal:  PLoS One       Date:  2014-09-17       Impact factor: 3.240

  3 in total

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