Literature DB >> 20625534

A Comparison of Using Taverna and BPEL in Building Scientific Workflows: the case of caGrid.

Wei Tan1, Paolo Missier, Ian Foster, Ravi Madduri, Carole Goble.   

Abstract

With the emergence of "service oriented science," the need arises to orchestrate multiple services to facilitate scientific investigation-that is, to create "science workflows." We present here our findings in providing a workflow solution for the caGrid service-based grid infrastructure. We choose BPEL and Taverna as candidates, and compare their usability in the lifecycle of a scientific workflow, including workflow composition, execution, and result analysis. Our experience shows that BPEL as an imperative language offers a comprehensive set of modeling primitives for workflows of all flavors; while Taverna offers a dataflow model and a more compact set of primitives that facilitates dataflow modeling and pipelined execution. We hope that this comparison study not only helps researchers select a language or tool that meets their specific needs, but also offers some insight on how a workflow language and tool can fulfill the requirement of the scientific community.

Entities:  

Year:  2010        PMID: 20625534      PMCID: PMC2901112          DOI: 10.1002/cpe.1547

Source DB:  PubMed          Journal:  Concurr Comput        ISSN: 1532-0626            Impact factor:   1.536


  3 in total

1.  Cyberinfrastructure: empowering a "third way" in biomedical research.

Authors:  Kenneth H Buetow
Journal:  Science       Date:  2005-05-06       Impact factor: 47.728

2.  Service-oriented science.

Authors:  Ian Foster
Journal:  Science       Date:  2005-05-06       Impact factor: 47.728

3.  caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid.

Authors:  Joel Saltz; Scott Oster; Shannon Hastings; Stephen Langella; Tahsin Kurc; William Sanchez; Manav Kher; Arumani Manisundaram; Krishnakant Shanbhag; Peter Covitz
Journal:  Bioinformatics       Date:  2006-06-09       Impact factor: 6.937

  3 in total
  2 in total

1.  On architecting and composing engineering information services to enable smart manufacturing.

Authors:  Boonserm Serm Kulvatunyou; Nenad Ivezic; Vijay Srinivasan
Journal:  J Comput Inf Sci Eng       Date:  2016-08-19       Impact factor: 1.855

2.  Current trends and new challenges of databases and web applications for systems driven biological research.

Authors:  Pradeep Kumar Sreenivasaiah; Do Han Kim
Journal:  Front Physiol       Date:  2010-12-03       Impact factor: 4.566

  2 in total

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