Literature DB >> 20622450

TAS1 trans-acting siRNA targets are differentially regulated at low temperature, and TAS1 trans-acting siRNA mediates temperature-controlled At1g51670 expression.

Kohei Kume1, Ken-Ichi Tsutsumi, Yasushi Saitoh.   

Abstract

To endure considerable fluctuations in temperature, plants need precise regulation of temperature-controlled gene expression. In this study, the involvement of TAS1 trans-acting siRNA (tasiRNA) in temperature-controlled gene expression was examined in Arabidopsis. The accumulation of TAS1 tasiRNA was downregulated at 4 degrees C. Concomitant with the reduction of TAS1 tasiRNA-mediated cleavage, expression of At1g51670, a target of TAS1 tasiRNA, was upregulated at 4 degrees C in the wild type but not in a dicer-like enzyme (DCL) 4 mutant (dcl4-2), which is impaired in tasiRNA biogenesis. The expression of At4g29760 and of At5g18040, further TAS1 tasiRNA targets, was upregulated both in the wild type and in dcl4-2 at 4 degrees C. However, after shifting the temperature to 22 degrees C, low-temperature-induced expression of At4g29760 rapidly dropped in the wild type, but not in dcl4-2. Thus TAS1 tasiRNA acted as a sweeper for the clearance of excess amounts of At4g29760 transcripts. Our data suggest that differential regulation of TAS1 tasiRNA targets is involved in temperature-controlled gene expression.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20622450     DOI: 10.1271/bbb.100111

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  12 in total

1.  The Functions of RNA-Dependent RNA Polymerases in Arabidopsis.

Authors:  Matthew R Willmann; Matthew W Endres; Rebecca T Cook; Brian D Gregory
Journal:  Arabidopsis Book       Date:  2011-07-31

2.  HEAT-INDUCED TAS1 TARGET1 Mediates Thermotolerance via HEAT STRESS TRANSCRIPTION FACTOR A1a-Directed Pathways in Arabidopsis.

Authors:  Shuxia Li; Jinxin Liu; Zhongyuan Liu; Xiaorong Li; Feijie Wu; Yuke He
Journal:  Plant Cell       Date:  2014-04-11       Impact factor: 11.277

3.  Extending the sRNAome of apple by next-generation sequencing.

Authors:  Marike Visser; Anelda P van der Walt; Hans J Maree; D Jasper G Rees; Johan T Burger
Journal:  PLoS One       Date:  2014-04-21       Impact factor: 3.240

4.  Identification of small RNAs during cold acclimation in Arabidopsis thaliana.

Authors:  Bhavika Tiwari; Kristin Habermann; M Asif Arif; Heinrich Lukas Weil; Antoni Garcia-Molina; Tatjana Kleine; Timo Mühlhaus; Wolfgang Frank
Journal:  BMC Plant Biol       Date:  2020-06-29       Impact factor: 4.215

5.  HTT2 promotes plant thermotolerance in Brassica rapa.

Authors:  Jianxia Jiang; Jinjuan Bai; Shuxia Li; Xiaorong Li; Liyong Yang; Yuke He
Journal:  BMC Plant Biol       Date:  2018-06-20       Impact factor: 4.215

6.  Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs.

Authors:  Cristiane P G Calixto; Nikoleta A Tzioutziou; Allan B James; Csaba Hornyik; Wenbin Guo; Runxuan Zhang; Hugh G Nimmo; John W S Brown
Journal:  Front Plant Sci       Date:  2019-02-28       Impact factor: 5.753

Review 7.  Plant Non-Coding RNAs: Origin, Biogenesis, Mode of Action and Their Roles in Abiotic Stress.

Authors:  Joram Kiriga Waititu; Chunyi Zhang; Jun Liu; Huan Wang
Journal:  Int J Mol Sci       Date:  2020-11-09       Impact factor: 5.923

8.  Identification of novel small ncRNAs in pollen of tomato.

Authors:  Kamila Lucia Bokszczanin; Nicolas Krezdorn; Sotirios Fragkostefanakis; Sören Müller; Lukas Rycak; Yuanyuan Chen; Klaus Hoffmeier; Jutta Kreutz; Marine J Paupière; Palak Chaturvedi; Rina Iannacone; Florian Müller; Hamed Bostan; Maria Luisa Chiusano; Klaus-Dieter Scharf; Björn Rotter; Enrico Schleiff; Peter Winter
Journal:  BMC Genomics       Date:  2015-09-18       Impact factor: 3.969

9.  Identification of ta-siRNAs and cis-nat-siRNAs in cassava and their roles in response to cassava bacterial blight.

Authors:  Andrés Quintero; Alvaro L Pérez-Quintero; Camilo López
Journal:  Genomics Proteomics Bioinformatics       Date:  2013-05-07       Impact factor: 7.691

Review 10.  Abiotic stress miRNomes in the Triticeae.

Authors:  Burcu Alptekin; Peter Langridge; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2016-09-24       Impact factor: 3.410

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.