Literature DB >> 20621112

Mechanism-based biomarker gene sets for glutathione depletion-related hepatotoxicity in rats.

Weihua Gao1, Yumiko Mizukawa, Noriyuki Nakatsu, Yosuke Minowa, Hiroshi Yamada, Yasuo Ohno, Tetsuro Urushidani.   

Abstract

Chemical-induced glutathione depletion is thought to be caused by two types of toxicological mechanisms: PHO-type glutathione depletion [glutathione conjugated with chemicals such as phorone (PHO) or diethyl maleate (DEM)], and BSO-type glutathione depletion [i.e., glutathione synthesis inhibited by chemicals such as l-buthionine-sulfoximine (BSO)]. In order to identify mechanism-based biomarker gene sets for glutathione depletion in rat liver, male SD rats were treated with various chemicals including PHO (40, 120 and 400 mg/kg), DEM (80, 240 and 800 mg/kg), BSO (150, 450 and 1500 mg/kg), and bromobenzene (BBZ, 10, 100 and 300 mg/kg). Liver samples were taken 3, 6, 9 and 24 h after administration and examined for hepatic glutathione content, physiological and pathological changes, and gene expression changes using Affymetrix GeneChip Arrays. To identify differentially expressed probe sets in response to glutathione depletion, we focused on the following two courses of events for the two types of mechanisms of glutathione depletion: a) gene expression changes occurring simultaneously in response to glutathione depletion, and b) gene expression changes after glutathione was depleted. The gene expression profiles of the identified probe sets for the two types of glutathione depletion differed markedly at times during and after glutathione depletion, whereas Srxn1 was markedly increased for both types as glutathione was depleted, suggesting that Srxn1 is a key molecule in oxidative stress related to glutathione. The extracted probe sets were refined and verified using various compounds including 13 additional positive or negative compounds, and they established two useful marker sets. One contained three probe sets (Akr7a3, Trib3 and Gstp1) that could detect conjugation-type glutathione depletors any time within 24h after dosing, and the other contained 14 probe sets that could detect glutathione depletors by any mechanism. These two sets, with appropriate scoring systems, could be promising biomarkers for preclinical examination of hepatotoxicity. 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20621112     DOI: 10.1016/j.taap.2010.06.015

Source DB:  PubMed          Journal:  Toxicol Appl Pharmacol        ISSN: 0041-008X            Impact factor:   4.219


  7 in total

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Authors:  Toufan Parman; Deborah I Bunin; Hanna H Ng; Jonathan E McDunn; Jacob E Wulff; Abraham Wang; Robert Swezey; Laura Rasay; David G Fairchild; Izet M Kapetanovic; Carol E Green
Journal:  Toxicol Sci       Date:  2011-09-13       Impact factor: 4.849

2.  Epigenetic mechanisms of mouse interstrain variability in genotoxicity of the environmental toxicant 1,3-butadiene.

Authors:  Igor Koturbash; Anne Scherhag; Jessica Sorrentino; Kenneth Sexton; Wanda Bodnar; James A Swenberg; Frederick A Beland; Fernando Pardo-Manuel Devillena; Ivan Rusyn; Igor P Pogribny
Journal:  Toxicol Sci       Date:  2011-05-20       Impact factor: 4.849

3.  Assessment of the involvement of oxidative stress and Mitogen-Activated Protein Kinase signaling pathways in the cytotoxic effects of arsenic trioxide and its combination with sulindac or its metabolites: sulindac sulfide and sulindac sulfone on human leukemic cell lines.

Authors:  M Stępnik; M Ferlińska; A Smok-Pieniążek; D Gradecka-Meesters; J Arkusz; M Stańczyk
Journal:  Med Oncol       Date:  2011-04-27       Impact factor: 3.064

4.  Open TG-GATEs: a large-scale toxicogenomics database.

Authors:  Yoshinobu Igarashi; Noriyuki Nakatsu; Tomoya Yamashita; Atsushi Ono; Yasuo Ohno; Tetsuro Urushidani; Hiroshi Yamada
Journal:  Nucleic Acids Res       Date:  2014-10-13       Impact factor: 16.971

5.  Fast food diet-induced non-alcoholic fatty liver disease exerts early protective effect against acetaminophen intoxication in mice.

Authors:  Tae Hyung Kim; Dahee Choi; Joo Young Kim; Jeong Hyeon Lee; Seung-Hoi Koo
Journal:  BMC Gastroenterol       Date:  2017-11-28       Impact factor: 3.067

6.  RNA-Seq profiling reveals novel hepatic gene expression pattern in aflatoxin B1 treated rats.

Authors:  B Alex Merrick; Dhiral P Phadke; Scott S Auerbach; Deepak Mav; Suzy M Stiegelmeyer; Ruchir R Shah; Raymond R Tice
Journal:  PLoS One       Date:  2013-04-22       Impact factor: 3.240

7.  Robust Co-clustering to Discover Toxicogenomic Biomarkers and Their Regulatory Doses of Chemical Compounds Using Logistic Probabilistic Hidden Variable Model.

Authors:  Mohammad Nazmol Hasan; Md Masud Rana; Anjuman Ara Begum; Moizur Rahman; Md Nurul Haque Mollah
Journal:  Front Genet       Date:  2018-11-01       Impact factor: 4.599

  7 in total

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