Literature DB >> 20616365

Validation of sensitivity and specificity of tetraplet-primed PCR (TP-PCR) in the molecular diagnosis of myotonic dystrophy type 2 (DM2).

Claudio Catalli1, Alessandra Morgante, Raniero Iraci, Fabrizio Rinaldi, Annalisa Botta, Giuseppe Novelli.   

Abstract

Myotonic dystrophy type 2 (DM2, OMIM #602688) is a multisystemic hereditary degenerative disease caused by a tetranucleotide CCTG expansion in the ZNF9 gene. Routine testing strategies for DM2 require the use of Southern blot or long-range PCR, but the presence of very large expansions and wide somatic mosaicism greatly reduce the sensitivity of these reference techniques. We therefore developed and validated a tetraplet-primed PCR (TP-PCR) method to detect the DM2 mutation by testing 87 DM2-positive and 76 DM2-negative previously characterized patients. The specificity of this technique was evaluated including DNA samples from 39 DM1-positive patients. We then attempted a prospective analysis of 50 patients with unknown genotype who referred to our center for diagnostic or presymptomatic tests. Results show that TP-PCR is a fast, reliable, and flexible technique, whose specificity and sensitivity is almost 100%, with no false positive or negative results either in retrospective and prospective applications. We therefore conclude that using this technique, in combination with the short-range PCR, is sufficient to correctly establish the presence or the absence of ZNF9 expanded alleles in the molecular diagnosis of DM2.

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Year:  2010        PMID: 20616365      PMCID: PMC2928423          DOI: 10.2353/jmoldx.2010.090239

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  35 in total

1.  Histopathological differences of myotonic dystrophy type 1 (DM1) and PROMM/DM2.

Authors:  A Vihola; G Bassez; G Meola; S Zhang; H Haapasalo; A Paetau; E Mancinelli; A Rouche; J Y Hogrel; P Laforêt; T Maisonobe; J F Pellissier; R Krahe; B Eymard; B Udd
Journal:  Neurology       Date:  2003-06-10       Impact factor: 9.910

Review 2.  Dynamic mutations: a new class of mutations causing human disease.

Authors:  R I Richards; G R Sutherland
Journal:  Cell       Date:  1992-09-04       Impact factor: 41.582

3.  Myotonic dystrophy type 2 caused by a CCTG expansion in intron 1 of ZNF9.

Authors:  C L Liquori; K Ricker; M L Moseley; J F Jacobsen; W Kress; S L Naylor; J W Day; L P Ranum
Journal:  Science       Date:  2001-08-03       Impact factor: 47.728

4.  Large expansion of the ATTCT pentanucleotide repeat in spinocerebellar ataxia type 10.

Authors:  T Matsuura; T Yamagata; D L Burgess; A Rasmussen; R P Grewal; K Watase; M Khajavi; A E McCall; C F Davis; L Zu; M Achari; S M Pulst; E Alonso; J L Noebels; D L Nelson; H Y Zoghbi; T Ashizawa
Journal:  Nat Genet       Date:  2000-10       Impact factor: 38.330

5.  A long PCR-based molecular protocol for detecting normal and expanded ZNF9 alleles in myotonic dystrophy type 2.

Authors:  Emanuela Bonifazi; Laura Vallo; Emiliano Giardina; Annalisa Botta; Giuseppe Novelli
Journal:  Diagn Mol Pathol       Date:  2004-09

6.  Improvement of the diagnostic procedure in proximal myotonic myopathy/myotonic dystrophy type 2.

Authors:  Sibylle Jakubiczka; Stefan Vielhaber; Wolfram Kress; Peter Küpferling; Ulrike Reuner; Bernhard Kunath; Peter Wieacker
Journal:  Neurogenetics       Date:  2003-12-10       Impact factor: 2.660

7.  Variation of the CGG repeat at the fragile X site results in genetic instability: resolution of the Sherman paradox.

Authors:  Y H Fu; D P Kuhl; A Pizzuti; M Pieretti; J S Sutcliffe; S Richards; A J Verkerk; J J Holden; R G Fenwick; S T Warren
Journal:  Cell       Date:  1991-12-20       Impact factor: 41.582

8.  Detection of large pathogenic expansions in FRDA1, SCA10, and SCA12 genes using a simple fluorescent repeat-primed PCR assay.

Authors:  Claudia Cagnoli; Chiara Michielotto; Tohru Matsuura; Tetsuo Ashizawa; Russell L Margolis; Susan E Holmes; Cinzia Gellera; Nicola Migone; Alfredo Brusco
Journal:  J Mol Diagn       Date:  2004-05       Impact factor: 5.568

9.  The correlation of age of onset with CTG trinucleotide repeat amplification in myotonic dystrophy.

Authors:  A Hunter; C Tsilfidis; G Mettler; P Jacob; M Mahadevan; L Surh; R Korneluk
Journal:  J Med Genet       Date:  1992-11       Impact factor: 6.318

10.  Molecular basis of myotonic dystrophy: expansion of a trinucleotide (CTG) repeat at the 3' end of a transcript encoding a protein kinase family member.

Authors:  J D Brook; M E McCurrach; H G Harley; A J Buckler; D Church; H Aburatani; K Hunter; V P Stanton; J P Thirion; T Hudson
Journal:  Cell       Date:  1992-02-21       Impact factor: 41.582

View more
  9 in total

Review 1.  Myotonic dystrophy type 2 and modifier genes: an update on clinical and pathomolecular aspects.

Authors:  Giovanni Meola; Rosanna Cardani
Journal:  Neurol Sci       Date:  2017-01-11       Impact factor: 3.307

2.  Prevalence and clinical correlates of sleep disordered breathing in myotonic dystrophy types 1 and 2.

Authors:  Maria Laura Ester Bianchi; Anna Losurdo; Chiara Di Blasi; Massimo Santoro; Marcella Masciullo; Giulia Conte; Venanzio Valenza; Antonello Damiani; Giacomo Della Marca; Gabriella Silvestri
Journal:  Sleep Breath       Date:  2013-12-06       Impact factor: 2.816

Review 3.  Biomolecular diagnosis of myotonic dystrophy type 2: a challenging approach.

Authors:  Giovanni Meola; Fiammetta Biasini; Rea Valaperta; Elena Costa; Rosanna Cardani
Journal:  J Neurol       Date:  2017-05-26       Impact factor: 4.849

Review 4.  Clinical aspects, molecular pathomechanisms and management of myotonic dystrophies.

Authors:  Giovanni Meola
Journal:  Acta Myol       Date:  2013-12

5.  Myotonic Dystrophy Type 2: An Update on Clinical Aspects, Genetic and Pathomolecular Mechanism.

Authors:  Giovanni Meola; Rosanna Cardani
Journal:  J Neuromuscul Dis       Date:  2015-07-22

6.  Distribution and Structure of DM2 Repeat Tract Alleles in the German Population.

Authors:  Alexis S Mahyera; Tamara Schneider; Birgit Halliger-Keller; Katja Schrooten; Eva-Maria Hörner; Simone Rost; Wolfram Kress
Journal:  Front Neurol       Date:  2018-06-19       Impact factor: 4.003

Review 7.  Myotonic Dystrophies: A Genetic Overview.

Authors:  Payam Soltanzadeh
Journal:  Genes (Basel)       Date:  2022-02-17       Impact factor: 4.096

8.  Characterization of full-length CNBP expanded alleles in myotonic dystrophy type 2 patients by Cas9-mediated enrichment and nanopore sequencing.

Authors:  Massimiliano Alfano; Luca De Antoni; Federica Centofanti; Virginia Veronica Visconti; Simone Maestri; Chiara Degli Esposti; Roberto Massa; Maria Rosaria D'Apice; Giuseppe Novelli; Massimo Delledonne; Annalisa Botta; Marzia Rossato
Journal:  Elife       Date:  2022-08-26       Impact factor: 8.713

9.  Identification and characterization of DM1 patients by a new diagnostic certified assay: neuromuscular and cardiac assessments.

Authors:  Rea Valaperta; Valeria Sansone; Fortunata Lombardi; Chiara Verdelli; Alessio Colombo; Massimiliano Valisi; Elisa Brigonzi; Elena Costa; Giovanni Meola
Journal:  Biomed Res Int       Date:  2013-05-09       Impact factor: 3.411

  9 in total

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