Literature DB >> 20616280

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri.

Simon E Prochnik1, James Umen, Aurora M Nedelcu, Armin Hallmann, Stephen M Miller, Ichiro Nishii, Patrick Ferris, Alan Kuo, Therese Mitros, Lillian K Fritz-Laylin, Uffe Hellsten, Jarrod Chapman, Oleg Simakov, Stefan A Rensing, Astrid Terry, Jasmyn Pangilinan, Vladimir Kapitonov, Jerzy Jurka, Asaf Salamov, Harris Shapiro, Jeremy Schmutz, Jane Grimwood, Erika Lindquist, Susan Lucas, Igor V Grigoriev, Rüdiger Schmitt, David Kirk, Daniel S Rokhsar.   

Abstract

The multicellular green alga Volvox carteri and its morphologically diverse close relatives (the volvocine algae) are well suited for the investigation of the evolution of multicellularity and development. We sequenced the 138-mega-base pair genome of V. carteri and compared its approximately 14,500 predicted proteins to those of its unicellular relative Chlamydomonas reinhardtii. Despite fundamental differences in organismal complexity and life history, the two species have similar protein-coding potentials and few species-specific protein-coding gene predictions. Volvox is enriched in volvocine-algal-specific proteins, including those associated with an expanded and highly compartmentalized extracellular matrix. Our analysis shows that increases in organismal complexity can be associated with modifications of lineage-specific proteins rather than large-scale invention of protein-coding capacity.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20616280      PMCID: PMC2993248          DOI: 10.1126/science.1188800

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  24 in total

Review 1.  Extracellular matrix and sex-inducing pheromone in Volvox.

Authors:  Armin Hallmann
Journal:  Int Rev Cytol       Date:  2003

2.  The deep roots of eukaryotes.

Authors:  S L Baldauf
Journal:  Science       Date:  2003-06-13       Impact factor: 47.728

3.  A kinesin, invA, plays an essential role in volvox morphogenesis.

Authors:  Ichiro Nishii; Satoshi Ogihara; David L Kirk
Journal:  Cell       Date:  2003-06-13       Impact factor: 41.582

4.  Evolution of key cell signaling and adhesion protein families predates animal origins.

Authors:  Nicole King; Christopher T Hittinger; Sean B Carroll
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

5.  Molecular timescales and the fossil record: a paleontological perspective.

Authors:  Robert R Reisz; Johannes Müller
Journal:  Trends Genet       Date:  2004-05       Impact factor: 11.639

6.  The role of lineage-specific gene family expansion in the evolution of eukaryotes.

Authors:  Olivier Lespinet; Yuri I Wolf; Eugene V Koonin; L Aravind
Journal:  Genome Res       Date:  2002-07       Impact factor: 9.043

7.  The role of GlsA in the evolution of asymmetric cell division in the green alga Volvox carteri.

Authors:  Qian Cheng; Rachel Fowler; Lai-wa Tam; Lisseth Edwards; Stephen M Miller
Journal:  Dev Genes Evol       Date:  2003-05-13       Impact factor: 0.900

8.  glsA, a Volvox gene required for asymmetric division and germ cell specification, encodes a chaperone-like protein.

Authors:  S M Miller; D L Kirk
Journal:  Development       Date:  1999-02       Impact factor: 6.868

9.  Cleavage patterns, cell lineages, and development of a cytoplasmic bridge system in Volvox embryos.

Authors:  K J Green; D L Kirk
Journal:  J Cell Biol       Date:  1981-12       Impact factor: 10.539

10.  Mechanism of formation, ultrastructure, and function of the cytoplasmic bridge system during morphogenesis in Volvox.

Authors:  K J Green; G I Viamontes; D L Kirk
Journal:  J Cell Biol       Date:  1981-12       Impact factor: 10.539

View more
  223 in total

1.  Dissecting plant genomes with the PLAZA comparative genomics platform.

Authors:  Michiel Van Bel; Sebastian Proost; Elisabeth Wischnitzki; Sara Movahedi; Christopher Scheerlinck; Yves Van de Peer; Klaas Vandepoele
Journal:  Plant Physiol       Date:  2011-12-23       Impact factor: 8.340

2.  Experimental evolution of multicellularity.

Authors:  William C Ratcliff; R Ford Denison; Mark Borrello; Michael Travisano
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-17       Impact factor: 11.205

Review 3.  Oxygen levels and the regulation of cell adhesion in the nervous system: a control point for morphogenesis in development, disease and evolution?

Authors:  Kathryn L Crossin
Journal:  Cell Adh Migr       Date:  2012 Jan-Feb       Impact factor: 3.405

4.  Evolution of the KCS gene family in plants: the history of gene duplication, sub/neofunctionalization and redundancy.

Authors:  Hai-Song Guo; Yan-Mei Zhang; Xiao-Qin Sun; Mi-Mi Li; Yue-Yu Hang; Jia-Yu Xue
Journal:  Mol Genet Genomics       Date:  2015-11-12       Impact factor: 3.291

Review 5.  The evolutionary landscape of PRC1 core components in green lineage.

Authors:  Dong-hong Chen; Yong Huang; Ying Ruan; Wen-Hui Shen
Journal:  Planta       Date:  2016-01-04       Impact factor: 4.116

6.  Origins of multicellular complexity: Volvox and the volvocine algae.

Authors:  Matthew D Herron
Journal:  Mol Ecol       Date:  2016-03-01       Impact factor: 6.185

7.  Regulation of the Chlamydomonas cell cycle by a stable, chromatin-associated retinoblastoma tumor suppressor complex.

Authors:  Bradley J S C Olson; Michael Oberholzer; Yubing Li; James M Zones; Harjivan S Kohli; Katerina Bisova; Su-Chiung Fang; Jill Meisenhelder; Tony Hunter; James G Umen
Journal:  Plant Cell       Date:  2010-10-26       Impact factor: 11.277

8.  Isolation and characterization of 4-hydroxy-3-methylbut-2-enyl diphosphate reductase gene from Botryococcus braunii, race B.

Authors:  Hidenobu Uchida; Koremitsu Sumimoto; Tomoka Oki; Ichiro Nishii; Eiichi Mizohata; Shigeki Matsunaga; Shigeru Okada
Journal:  J Plant Res       Date:  2018-05-03       Impact factor: 2.629

9.  Morphological and ultrastructural characterization of the acidophilic and lipid-producer strain Chlamydomonas acidophila LAFIC-004 (Chlorophyta) under different culture conditions.

Authors:  Luana Dos S Souza; Carmen Simioni; Zenilda L Bouzon; Rosana de Cassia da S Schneider; Pablo Gressler; Maria Cecília Miotto; Marcio J Rossi; Leonardo R Rörig
Journal:  Protoplasma       Date:  2016-09-30       Impact factor: 3.356

10.  Evolutionary divergence of the sex-determining gene MID uncoupled from the transition to anisogamy in volvocine algae.

Authors:  Sa Geng; Ayano Miyagi; James G Umen
Journal:  Development       Date:  2018-04-09       Impact factor: 6.868

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.