Literature DB >> 20616002

A structural basis for antigen recognition by the T cell-like lymphocytes of sea lamprey.

Lu Deng1, C Alejandro Velikovsky, Gang Xu, Lakshminarayan M Iyer, Satoshi Tasumi, Melissa C Kerzic, Martin F Flajnik, L Aravind, Zeev Pancer, Roy A Mariuzza.   

Abstract

Adaptive immunity in jawless vertebrates is mediated by leucine-rich repeat proteins called "variable lymphocyte receptors" (VLRs). Two types of VLR (A and B) are expressed by mutually exclusive lymphocyte populations in lamprey. VLRB lymphocytes resemble the B cells of jawed vertebrates; VLRA lymphocytes are similar to T cells. We determined the structure of a high-affinity VLRA isolated from lamprey immunized with hen egg white lysozyme (HEL) in unbound and antigen-bound forms. The VLRA-HEL complex demonstrates that certain VLRAs, like gammadelta T-cell receptors (TCRs) but unlike alphabeta TCRs, can recognize antigens directly, without a requirement for processing or antigen-presenting molecules. Thus, these VLRAs feature the nanomolar affinities of antibodies, the direct recognition of unprocessed antigens of both antibodies and gammadelta TCRs, and the exclusive expression on the lymphocyte surface that is unique to alphabeta and gammadelta TCRs.

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Year:  2010        PMID: 20616002      PMCID: PMC2922149          DOI: 10.1073/pnas.1005475107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Antibody multispecificity mediated by conformational diversity.

Authors:  Leo C James; Pietro Roversi; Dan S Tawfik
Journal:  Science       Date:  2003-02-28       Impact factor: 47.728

Review 2.  Molecular recognition in antibody-antigen complexes.

Authors:  Eric J Sundberg; Roy A Mariuzza
Journal:  Adv Protein Chem       Date:  2002

3.  Crystal structure of a shark single-domain antibody V region in complex with lysozyme.

Authors:  Robyn L Stanfield; Helen Dooley; Martin F Flajnik; Ian A Wilson
Journal:  Science       Date:  2004-08-19       Impact factor: 47.728

4.  Structure of a gammadelta T cell receptor in complex with the nonclassical MHC T22.

Authors:  Erin J Adams; Yueh-Hsiu Chien; K Christopher Garcia
Journal:  Science       Date:  2005-04-08       Impact factor: 47.728

5.  Affinity dependence of the B cell response to antigen: a threshold, a ceiling, and the importance of off-rate.

Authors:  F D Batista; M S Neuberger
Journal:  Immunity       Date:  1998-06       Impact factor: 31.745

Review 6.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

Review 7.  Antibody-antigen complexes.

Authors:  D R Davies; S Sheriff; E A Padlan
Journal:  J Biol Chem       Date:  1988-08-05       Impact factor: 5.157

8.  Shape complementarity at protein/protein interfaces.

Authors:  M C Lawrence; P M Colman
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

9.  Somatic diversification of variable lymphocyte receptors in the agnathan sea lamprey.

Authors:  Zeev Pancer; Chris T Amemiya; Götz R A Ehrhardt; Jill Ceitlin; G Larry Gartland; Max D Cooper
Journal:  Nature       Date:  2004-07-08       Impact factor: 49.962

10.  CDR3 length in antigen-specific immune receptors.

Authors:  E P Rock; P R Sibbald; M M Davis; Y H Chien
Journal:  J Exp Med       Date:  1994-01-01       Impact factor: 14.307

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  32 in total

1.  Variable lymphocyte receptor recognition of the immunodominant glycoprotein of Bacillus anthracis spores.

Authors:  Robert N Kirchdoerfer; Brantley R Herrin; Byung Woo Han; Charles L Turnbough; Max D Cooper; Ian A Wilson
Journal:  Structure       Date:  2012-03-07       Impact factor: 5.006

2.  Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering.

Authors:  Sang-Chul Lee; Keunwan Park; Jieun Han; Joong-jae Lee; Hyun Jung Kim; Seungpyo Hong; Woosung Heu; Yu Jung Kim; Jae-Seok Ha; Seung-Goo Lee; Hae-Kap Cheong; Young Ho Jeon; Dongsup Kim; Hak-Sung Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-10       Impact factor: 11.205

3.  Biochemical Regulatory Features of Activation-Induced Cytidine Deaminase Remain Conserved from Lampreys to Humans.

Authors:  Emma M Quinlan; Justin J King; Chris T Amemiya; Ellen Hsu; Mani Larijani
Journal:  Mol Cell Biol       Date:  2017-09-26       Impact factor: 4.272

4.  Definition of a third VLR gene in hagfish.

Authors:  Jianxu Li; Sabyasachi Das; Brantley R Herrin; Masayuki Hirano; Max D Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-26       Impact factor: 11.205

5.  Overexpression, crystallization and preliminary X-ray crystallographic analysis of the variable lymphocyte receptor 2913 ectodomain fused with internalin B.

Authors:  Ji Yeon Lee; Hyoun Sook Kim; In Wha Baek; Jang Mi Back; Mi Ra Han; Sun Young Kong; Ji Hyeon Kim; Robert N Kirchdoerfer; Jae Ouk Kim; Max D Cooper; Ian A Wilson; Hyun-Jung Kim; Byung Woo Han
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-12-20

6.  Selection of the lamprey VLRC antigen receptor repertoire.

Authors:  Stephen J Holland; Mingming Gao; Masayuki Hirano; Lakshminarayan M Iyer; Ming Luo; Michael Schorpp; Max D Cooper; L Aravind; Roy A Mariuzza; Thomas Boehm
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-16       Impact factor: 11.205

7.  Copy number and sequence variation of leucine-rich repeat modules suggests distinct functional constraints operating on variable lymphocyte receptors expressed by agnathan T cell-like and B cell-like lymphocytes.

Authors:  Yoichi Sutoh; Masanori Kasahara
Journal:  Immunogenetics       Date:  2014-04-24       Impact factor: 2.846

Review 8.  A cold-blooded view of adaptive immunity.

Authors:  Martin F Flajnik
Journal:  Nat Rev Immunol       Date:  2018-07       Impact factor: 53.106

9.  Chronic lymphocytic leukemia monitoring with a Lamprey idiotope-specific antibody.

Authors:  Hirotomo Nakahara; Brantley R Herrin; Matthew N Alder; Rosa Catera; Xiao-Jie Yan; Nicholas Chiorazzi; Max D Cooper
Journal:  Cancer Immunol Res       Date:  2013-10       Impact factor: 11.151

10.  Organization of lamprey variable lymphocyte receptor C locus and repertoire development.

Authors:  Sabyasachi Das; Masayuki Hirano; Narges Aghaallaei; Baubak Bajoghli; Thomas Boehm; Max D Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-04       Impact factor: 11.205

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