Literature DB >> 20614958

A variational formulation of the polarizable continuum model.

Filippo Lipparini1, Giovanni Scalmani, Benedetta Mennucci, Eric Cancès, Marco Caricato, Michael J Frisch.   

Abstract

Continuum solvation models are widely used to accurately estimate solvent effects on energy, structural and spectroscopic properties of complex molecular systems. The polarizable continuum model (PCM) is one of the most versatile among the continuum models because of the variety of properties that can be computed and the diversity of methods that can be used to describe the solute from molecular mechanics (MM) to sophisticated quantum mechanical (QM) post-self-consistent field methods or even hybrid QM/MM methods. In this contribution, we present a new formulation of PCM in terms of a free energy functional whose variational parameters include the continuum polarization (represented by the apparent surface charges), the solute's atomic coordinates and-possibly-its electronic density. The problem of finding the optimized geometry of the (polarized) solute, with the corresponding self-consistent reaction field, is recast as the minimization of this free energy functional, simultaneously with respect to all its variables. The numerous potential applications of this variational formulation of PCM are discussed, including simultaneous optimization of solute's geometry and polarization charges and extended Lagrangian dynamics. In particular, we describe in details the simultaneous optimization procedure and we include several numerical examples.

Year:  2010        PMID: 20614958     DOI: 10.1063/1.3454683

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  10 in total

1.  Polarizable molecular dynamics in a polarizable continuum solvent.

Authors:  Filippo Lipparini; Louis Lagardère; Christophe Raynaud; Benjamin Stamm; Eric Cancès; Benedetta Mennucci; Michael Schnieders; Pengyu Ren; Yvon Maday; Jean-Philip Piquemal
Journal:  J Chem Theory Comput       Date:  2015-02-10       Impact factor: 6.006

2.  Tautomeric Equilibria of Nucleobases in the Hachimoji Expanded Genetic Alphabet.

Authors:  Lukas Eberlein; Frank R Beierlein; Nico J R van Eikema Hommes; Ashish Radadiya; Jochen Heil; Steven A Benner; Timothy Clark; Stefan M Kast; Nigel G J Richards
Journal:  J Chem Theory Comput       Date:  2020-03-20       Impact factor: 6.006

3.  Determination of two-photon absorption in nucleobase analogues: a QR-DFT perspective.

Authors:  Thomas Malcomson
Journal:  Photochem Photobiol Sci       Date:  2022-02-18       Impact factor: 3.982

4.  Real-time detection of single-molecule reaction by plasmon-enhanced spectroscopy.

Authors:  Chao-Yu Li; Sai Duan; Jun Yi; Chen Wang; Petar M Radjenovic; Zhong-Qun Tian; Jian-Feng Li
Journal:  Sci Adv       Date:  2020-06-10       Impact factor: 14.136

5.  Experimental and theoretical studies on the synthesis of 1,4,5-trisubstituted pyrrolidine-2,3-diones.

Authors:  Nguyen Tran Nguyen; Vo Viet Dai; Nguyen Ngoc Tri; Luc Van Meervelt; Nguyen Tien Trung; Wim Dehaen
Journal:  Beilstein J Org Chem       Date:  2022-08-31       Impact factor: 2.544

6.  Vertical Electronic Excitations in Solution with the EOM-CCSD Method Combined with a Polarizable Explicit/Implicit Solvent Model.

Authors:  Marco Caricato; Filippo Lipparini; Giovanni Scalmani; Chiara Cappelli; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2013-07-09       Impact factor: 6.006

7.  A gauge invariant multiscale approach to magnetic spectroscopies in condensed phase: general three-layer model, computational implementation and pilot applications.

Authors:  Filippo Lipparini; Chiara Cappelli; Vincenzo Barone
Journal:  J Chem Phys       Date:  2013-06-21       Impact factor: 3.488

8.  A Fluorescent Cy7-Mercaptopyridine for the Selective Detection of Glutathione over Homocysteine and Cysteine.

Authors:  Shin A Yoon; Wantae Kim; Amit Sharma; Peter Verwilst; Miae Won; Min Hee Lee
Journal:  Sensors (Basel)       Date:  2018-09-01       Impact factor: 3.576

9.  Towards large scale hybrid QM/MM dynamics of complex systems with advanced point dipole polarizable embeddings.

Authors:  Daniele Loco; Louis Lagardère; Gérardo A Cisneros; Giovanni Scalmani; Michael Frisch; Filippo Lipparini; Benedetta Mennucci; Jean-Philip Piquemal
Journal:  Chem Sci       Date:  2019-06-11       Impact factor: 9.825

10.  Novel synthetic pathway for the production of phosgene.

Authors:  Patrick Voßnacker; Alisa Wüst; Thomas Keilhack; Carsten Müller; Simon Steinhauer; Helmut Beckers; Sivathmeehan Yogendra; Yuliya Schiesser; Rainer Weber; Marc Reimann; Robert Müller; Martin Kaupp; Sebastian Riedel
Journal:  Sci Adv       Date:  2021-09-29       Impact factor: 14.136

  10 in total

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