Literature DB >> 2060642

Interaction between the left-handed Z-DNA and polyamine. The crystal structure of the d(CG)3 and N-(2-aminoethyl)-1,4-diamino-butane complex.

H Ohishi1, S Kunisawa, G van der Marel, J H van Boom, A Rich, A H Wang, K Tomita, T Hakoshima.   

Abstract

The DNA fragment d(CG)3 was co-crystallized with N-(2-aminoethyl)-1,4-diaminobutane (PA(24], a chemically synthesized polyamine. The complex crystal contained one polyamine, 3 magnesium cations and one sodium cation per duplex of d(CG)3, and well diffracted the X-ray intensities up to 1.0 A resolution. The d(CG)3 took a left-handed Z-DNA conformation, and the PA(24) molecule electrostatically interacted with the phosphate groups of the d(CG)3 duplex.

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Year:  1991        PMID: 2060642     DOI: 10.1016/0014-5793(91)80694-x

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  4 in total

1.  AMOEBA Polarizable Atomic Multipole Force Field for Nucleic Acids.

Authors:  Changsheng Zhang; Chao Lu; Zhifeng Jing; Chuanjie Wu; Jean-Philip Piquemal; Jay W Ponder; Pengyu Ren
Journal:  J Chem Theory Comput       Date:  2018-03-06       Impact factor: 6.006

2.  Polarizable Force Field for DNA Based on the Classical Drude Oscillator: II. Microsecond Molecular Dynamics Simulations of Duplex DNA.

Authors:  Justin A Lemkul; Alexander D MacKerell
Journal:  J Chem Theory Comput       Date:  2017-04-19       Impact factor: 6.006

3.  Phosphates in the Z-DNA dodecamer are flexible, but their P-SAD signal is sufficient for structure solution.

Authors:  Zhipu Luo; Miroslawa Dauter; Zbigniew Dauter
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-06-24

4.  High regularity of Z-DNA revealed by ultra high-resolution crystal structure at 0.55 A.

Authors:  Krzysztof Brzezinski; Anna Brzuszkiewicz; Miroslawa Dauter; Maciej Kubicki; Mariusz Jaskolski; Zbigniew Dauter
Journal:  Nucleic Acids Res       Date:  2011-04-01       Impact factor: 16.971

  4 in total

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