Literature DB >> 20601481

Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon Coast.

Hyun-Myung Oh1, Ilnam Kang, Steve Ferriera, Stephen J Giovannoni, Jang-Cheon Cho.   

Abstract

Strain HTCC2143 was isolated from Oregon Coast surface waters using dilution-to-extinction culturing. Here we present the genome of strain HTCC2143 from the BD1-7 clade of the oligotrophic marine Gammaproteobacteria group. The genome of HTCC2143 contains genes for carotenoid biosynthesis and proteorhodopsin and for proteins that have potential biotechnological significance: epoxide hydrolases, Baeyer-Villiger monooxygenases, and polyketide synthases.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20601481      PMCID: PMC2937397          DOI: 10.1128/JB.00683-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  12 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria.

Authors:  Jang-Cheon Cho; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

3.  The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin.

Authors:  Ulrich Stingl; Russell A Desiderio; Jang-Cheon Cho; Kevin L Vergin; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2007-02-09       Impact factor: 4.792

4.  Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean.

Authors:  Regina Schauer; Christina Bienhold; Alban Ramette; Jens Harder
Journal:  ISME J       Date:  2009-10-15       Impact factor: 10.302

Review 5.  The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes.

Authors:  M J Bessman; D N Frick; S F O'Handley
Journal:  J Biol Chem       Date:  1996-10-11       Impact factor: 5.157

6.  Genome sequence of Lentisphaera araneosa HTCC2155T, the type species of the order Lentisphaerales in the phylum Lentisphaerae.

Authors:  J Cameron Thrash; Jang-Cheon Cho; Kevin L Vergin; Robert M Morris; Stephen J Giovannoni
Journal:  J Bacteriol       Date:  2010-04-02       Impact factor: 3.490

7.  Dasania marina gen. nov., sp. nov., of the order Pseudomonadales, isolated from Arctic marine sediment.

Authors:  Yoo Kyung Lee; Soon Gyu Hong; Hyun Hee Cho; Kyeung Hee Cho; Hong Kum Lee
Journal:  J Microbiol       Date:  2007-12       Impact factor: 3.422

8.  Abundance and diversity of microbial life in ocean crust.

Authors:  Cara M Santelli; Beth N Orcutt; Erin Banning; Wolfgang Bach; Craig L Moyer; Mitchell L Sogin; Hubert Staudigel; Katrina J Edwards
Journal:  Nature       Date:  2008-05-29       Impact factor: 49.962

9.  Complete genome sequence of Erythrobacter litoralis HTCC2594.

Authors:  Hyun-Myung Oh; Stephen J Giovannoni; Steve Ferriera; Justin Johnson; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2009-01-23       Impact factor: 3.490

10.  Cloning and characterization of three epoxide hydrolases from a marine bacterium, Erythrobacter litoralis HTCC2594.

Authors:  Jung-Hee Woo; Young-Ok Hwang; Sung Gyun Kang; Hyun Sook Lee; Jang-Cheon Cho; Sang-Jin Kim
Journal:  Appl Microbiol Biotechnol       Date:  2007-05-31       Impact factor: 4.813

View more
  6 in total

1.  Seasonal Stability in the Microbiomes of Temperate Gorgonians and the Red Coral Corallium rubrum Across the Mediterranean Sea.

Authors:  Jeroen A J M van de Water; Christian R Voolstra; Cecile Rottier; Silvia Cocito; Andrea Peirano; Denis Allemand; Christine Ferrier-Pagès
Journal:  Microb Ecol       Date:  2017-07-05       Impact factor: 4.552

2.  Der f 34, a Novel Major House Dust Mite Allergen Belonging to a Highly Conserved Rid/YjgF/YER057c/UK114 Family of Imine Deaminases.

Authors:  Kareem Gamal ElRamlawy; Takashi Fujimura; Koji Baba; Ji Won Kim; Chika Kawamoto; Toshihide Isobe; Takuya Abe; Kelsey Hodge-Hanson; Diana M Downs; Inas Hussein Refaat; Diaa Beshr Al-Azhary; Tsunehiro Aki; Yoshiko Asaoku; Takaharu Hayashi; Takashi Katsutani; Shinji Tsuboi; Kazuhisa Ono; Seiji Kawamoto
Journal:  J Biol Chem       Date:  2016-08-18       Impact factor: 5.157

3.  A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters.

Authors:  Joseph J Grzymski; Christian S Riesenfeld; Timothy J Williams; Alex M Dussaq; Hugh Ducklow; Matthew Erickson; Ricardo Cavicchioli; Alison E Murray
Journal:  ISME J       Date:  2012-04-26       Impact factor: 10.302

4.  A taxonomic framework for emerging groups of ecologically important marine gammaproteobacteria based on the reconstruction of evolutionary relationships using genome-scale data.

Authors:  Stefan Spring; Carmen Scheuner; Markus Göker; Hans-Peter Klenk
Journal:  Front Microbiol       Date:  2015-04-09       Impact factor: 5.640

5.  Metagenome-assembled genomes uncover a global brackish microbiome.

Authors:  Luisa W Hugerth; John Larsson; Johannes Alneberg; Markus V Lindh; Catherine Legrand; Jarone Pinhassi; Anders F Andersson
Journal:  Genome Biol       Date:  2015-12-14       Impact factor: 13.583

Review 6.  Host-microbe interactions in octocoral holobionts - recent advances and perspectives.

Authors:  Jeroen A J M van de Water; Denis Allemand; Christine Ferrier-Pagès
Journal:  Microbiome       Date:  2018-04-02       Impact factor: 14.650

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.