Literature DB >> 20600701

A versatile set of tagged expression vectors to monitor protein localisation and function in Dictyostelium.

Manu Dubin1, Wolfgang Nellen.   

Abstract

We describe here a series of vectors for ectopic expression of tagged proteins in Dictyostelium discoideum. These vectors allow the addition of N- or C-terminal tags (GFP, mRFP, 3xFLAG, 3xHA, 6xMYC or TAP) with an optimised polylinker sequence and no additional amino acid residues at the N- or C-terminus of the protein. The expression cassettes were introduced into vectors containing Blasticidin or Geneticin resistance markers and into integrating as well as extrachromosomal plasmids. The vectors are designed as high and low copy versions and thus allow for a limited expression level control. They are also convenient with regard to complementation, co- and super-transformation. Finally the vectors share standardised cloning sites, so that a gene of interest can be easily transferred between vectors as experimental requirements evolve. These vectors were used to study the localisation of several putative RNA processing proteins including EriA and DicerB. (c) 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20600701     DOI: 10.1016/j.gene.2010.06.010

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  15 in total

1.  Characterization of the Dictyostelium homolog of chromatin binding protein DET1 suggests a conserved pathway regulating cell type specification and developmental plasticity.

Authors:  Manu J Dubin; Sonja Kasten; Wolfgang Nellen
Journal:  Eukaryot Cell       Date:  2010-12-30

2.  MicroRNAs in Amoebozoa: deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs.

Authors:  Lotta Avesson; Johan Reimegård; E Gerhart H Wagner; Fredrik Söderbom
Journal:  RNA       Date:  2012-08-08       Impact factor: 4.942

Review 3.  Selectable genetic markers for nematode transgenesis.

Authors:  Rosina Giordano-Santini; Denis Dupuy
Journal:  Cell Mol Life Sci       Date:  2011-03-24       Impact factor: 9.261

4.  Pharmacogenetics of resistance to Cisplatin and other anticancer drugs and the role of sphingolipid metabolism.

Authors:  Stephen Alexander; William S Swatson; Hannah Alexander
Journal:  Methods Mol Biol       Date:  2013

5.  A functional connection of Dictyostelium paracaspase with the contractile vacuole and a possible partner of the vacuolar proton ATPase.

Authors:  Entsar Saheb; Ithay Biton; Katherine Maringer; John Bush
Journal:  J Biosci       Date:  2013-09       Impact factor: 1.826

6.  Analysis of the Microprocessor in Dictyostelium: The Role of RbdB, a dsRNA Binding Protein.

Authors:  Doreen Meier; Janis Kruse; Jann Buttlar; Michael Friedrich; Fides Zenk; Benjamin Boesler; Konrad U Förstner; Christian Hammann; Wolfgang Nellen
Journal:  PLoS Genet       Date:  2016-06-06       Impact factor: 5.917

7.  The protein domains of the Dictyostelium microprocessor that are required for correct subcellular localization and for microRNA maturation.

Authors:  Janis Kruse; Doreen Meier; Fides Zenk; Maren Rehders; Wolfgang Nellen; Christian Hammann
Journal:  RNA Biol       Date:  2016-07-14       Impact factor: 4.652

8.  The 5' spreading of small RNAs in Dictyostelium discoideum depends on the RNA-dependent RNA polymerase RrpC and on the dicer-related nuclease DrnB.

Authors:  Stephan Wiegand; Christian Hammann
Journal:  PLoS One       Date:  2013-05-20       Impact factor: 3.240

9.  PakB binds to the SH3 domain of Dictyostelium Abp1 and regulates its effects on cell polarity and early development.

Authors:  Yidai Yang; Marc de la Roche; Scott W Crawley; Zhihao Li; Emilia Furmaniak-Kazmierczak; Graham P Côté
Journal:  Mol Biol Cell       Date:  2013-05-22       Impact factor: 4.138

10.  Biological Activity of the Alternative Promoters of the Dictyostelium discoideum Adenylyl Cyclase A Gene.

Authors:  Javier Rodriguez-Centeno; Leandro Sastre
Journal:  PLoS One       Date:  2016-02-03       Impact factor: 3.240

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