Literature DB >> 20600287

Great challenges with few subjects: statistical strategies for neuroscientists.

Shinichi Nakagawa1, Mark E Hauber.   

Abstract

Neuroscience is one of the most heavily experimental fields of biological and medical research. As such, statistical approaches have traditionally focused on testing specific predictions based upon well-focused hypotheses. However, neuroscience data are often derived from repeated measurements and stimulus type presentations with a limited number of subjects, some of which may have incomplete data per subject. Here we provide an introduction to a group of diverse and powerful statistical approaches, which we term the '5 Ms', which have been successfully used in other fields of biological research facing similar constraints. Specifically, we detail how M1: meta-analysis can combine, reconcile, and analyse between- and within-study results, M2: mixed-effects modelling is beneficial through replacing statistical tests involving pseudoreplication, M3: multiple imputation may be used to account for the biases caused by missing data arising from incomplete experimental protocols, and M4: model averaging from information-theoretic approaches allows to discriminate among alternative functional hypotheses. We also provide a brief introduction to Bayesian statistics using M5: Markov chain Monte Carlo (MCMC). Taken together, these approaches provide neuroscientists with a robust statistical toolbox containing elements that alleviate some of the analytical constraints generated by limited sample sizes, repeated subject use, and incomplete replicates of experimental manipulation.
Copyright © 2010 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2010        PMID: 20600287     DOI: 10.1016/j.neubiorev.2010.06.003

Source DB:  PubMed          Journal:  Neurosci Biobehav Rev        ISSN: 0149-7634            Impact factor:   8.989


  9 in total

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Authors:  Stanley E Lazic
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2.  Experience dependence of neural responses to different classes of male songs in the primary auditory forebrain of female songbirds.

Authors:  Mark E Hauber; Sarah M N Woolley; Phillip Cassey; Frédéric E Theunissen
Journal:  Behav Brain Res       Date:  2013-01-15       Impact factor: 3.332

3.  The vocal repertoire of the domesticated zebra finch: a data-driven approach to decipher the information-bearing acoustic features of communication signals.

Authors:  Julie E Elie; Frédéric E Theunissen
Journal:  Anim Cogn       Date:  2015-11-18       Impact factor: 3.084

4.  Acute physiological stress promotes clustering of synaptic markers and alters spine morphology in the hippocampus.

Authors:  Veronica Sebastian; Jim Brian Estil; Daniel Chen; Lisa M Schrott; Peter A Serrano
Journal:  PLoS One       Date:  2013-10-24       Impact factor: 3.240

5.  Impact of prenatal stress on offspring glucocorticoid levels: A phylogenetic meta-analysis across 14 vertebrate species.

Authors:  Zaneta M Thayer; Meredith A Wilson; Andrew W Kim; Adrian V Jaeggi
Journal:  Sci Rep       Date:  2018-03-21       Impact factor: 4.379

6.  Occupancy of wild southern pig-tailed macaques in intact and degraded forests in Peninsular Malaysia.

Authors:  Anna Holzner; D Mark Rayan; Jonathan Moore; Cedric Kai Wei Tan; Laura Clart; Lars Kulik; Hjalmar Kühl; Nadine Ruppert; Anja Widdig
Journal:  PeerJ       Date:  2021-12-14       Impact factor: 2.984

7.  Ribosome profiling in mouse hippocampus: plasticity-induced regulation and bidirectional control by TSC2 and FMRP.

Authors:  Annie Hien; Gemma Molinaro; Botao Liu; Kimberly M Huber; Joel D Richter
Journal:  Mol Autism       Date:  2020-10-14       Impact factor: 7.509

8.  Probabilistic inference of short-term synaptic plasticity in neocortical microcircuits.

Authors:  Rui P Costa; P Jesper Sjöström; Mark C W van Rossum
Journal:  Front Comput Neurosci       Date:  2013-06-06       Impact factor: 2.380

9.  Schizophrenia-associated variation at ZNF804A correlates with altered experience-dependent dynamics of sleep slow waves and spindles in healthy young adults.

Authors:  Ullrich Bartsch; Laura J Corbin; Charlotte Hellmich; Michelle Taylor; Kayleigh E Easey; Claire Durant; Hugh M Marston; Nicholas J Timpson; Matthew W Jones
Journal:  Sleep       Date:  2021-12-10       Impact factor: 5.849

  9 in total

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