Literature DB >> 20597107

The association of telomere length and genetic variation in telomere biology genes.

Lisa Mirabello1, Kai Yu, Peter Kraft, Immaculata De Vivo, David J Hunter, Jennifer Prescott, Jason Y Y Wong, Nilanjan Chatterjee, Richard B Hayes, Sharon A Savage.   

Abstract

Telomeres cap chromosome ends and are critical for genomic stability. Many telomere-associated proteins are important for telomere length maintenance. Recent genome-wide association studies (GWAS) have identified single nucleotide polymorphisms (SNPs) in genes encoding telomere-associated proteins (RTEL1 and TERT-CLPTM1) as markers of cancer risk. We conducted an association study of telomere length and 743 SNPs in 43 telomere biology genes. Telomere length in peripheral blood DNA was determined by Q-PCR in 3,646 participants from the Prostate, Lung, Colorectal, and Ovarian Cancer Screening Trial and Nurses' Health Study. We investigated associations by SNP, gene, and pathway (functional group). We found no associations between telomere length and SNPs in TERT-CLPTM1L or RTEL1. Telomere length was not significantly associated with specific functional groups. Thirteen SNPs from four genes (MEN1, MRE11A, RECQL5, and TNKS) were significantly associated with telomere length. The strongest findings were in MEN1 (gene-based P=0.006), menin, which associates with the telomerase promoter and may negatively regulate telomerase. This large association study did not find strong associations with telomere length. The combination of limited diversity and evolutionary conservation suggest that these genes may be under selective pressure. More work is needed to explore the role of genetic variants in telomere length regulation. Published 2010 Wiley-Liss, Inc.

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Year:  2010        PMID: 20597107      PMCID: PMC2932868          DOI: 10.1002/humu.21314

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  66 in total

1.  Mapping of a major locus that determines telomere length in humans.

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Journal:  Am J Hum Genet       Date:  2004-11-01       Impact factor: 11.025

2.  MRE11-RAD50-NBS1 and ATM function as co-mediators of TRF1 in telomere length control.

Authors:  Yili Wu; Shujie Xiao; Xu-Dong Zhu
Journal:  Nat Struct Mol Biol       Date:  2007-08-12       Impact factor: 15.369

3.  The Prostate, Lung, Colorectal and Ovarian (PLCO) Cancer Screening Trial of the National Cancer Institute: history, organization, and status.

Authors:  J K Gohagan; P C Prorok; R B Hayes; B S Kramer
Journal:  Control Clin Trials       Date:  2000-12

Review 4.  The human telomere and its relationship to human disease, therapy, and tissue engineering.

Authors:  Ian K Moon; Michael B Jarstfer
Journal:  Front Biosci       Date:  2007-05-01

5.  Common genetic variants on 5p15.33 contribute to risk of lung adenocarcinoma in a Chinese population.

Authors:  Guangfu Jin; Lin Xu; Yongqian Shu; Tian Tian; Jie Liang; Yan Xu; Furu Wang; Jianjian Chen; Juncheng Dai; Zhibin Hu; Hongbing Shen
Journal:  Carcinogenesis       Date:  2009-04-15       Impact factor: 4.944

Review 6.  Telomeres and aging.

Authors:  Geraldine Aubert; Peter M Lansdorp
Journal:  Physiol Rev       Date:  2008-04       Impact factor: 37.312

7.  A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33.

Authors:  Gloria M Petersen; Laufey Amundadottir; Charles S Fuchs; Peter Kraft; Rachael Z Stolzenberg-Solomon; Kevin B Jacobs; Alan A Arslan; H Bas Bueno-de-Mesquita; Steven Gallinger; Myron Gross; Kathy Helzlsouer; Elizabeth A Holly; Eric J Jacobs; Alison P Klein; Andrea LaCroix; Donghui Li; Margaret T Mandelson; Sara H Olson; Harvey A Risch; Wei Zheng; Demetrius Albanes; William R Bamlet; Christine D Berg; Marie-Christine Boutron-Ruault; Julie E Buring; Paige M Bracci; Federico Canzian; Sandra Clipp; Michelle Cotterchio; Mariza de Andrade; Eric J Duell; J Michael Gaziano; Edward L Giovannucci; Michael Goggins; Göran Hallmans; Susan E Hankinson; Manal Hassan; Barbara Howard; David J Hunter; Amy Hutchinson; Mazda Jenab; Rudolf Kaaks; Charles Kooperberg; Vittorio Krogh; Robert C Kurtz; Shannon M Lynch; Robert R McWilliams; Julie B Mendelsohn; Dominique S Michaud; Hemang Parikh; Alpa V Patel; Petra H M Peeters; Aleksandar Rajkovic; Elio Riboli; Laudina Rodriguez; Daniela Seminara; Xiao-Ou Shu; Gilles Thomas; Anne Tjønneland; Geoffrey S Tobias; Dimitrios Trichopoulos; Stephen K Van Den Eeden; Jarmo Virtamo; Jean Wactawski-Wende; Zhaoming Wang; Brian M Wolpin; Herbert Yu; Kai Yu; Anne Zeleniuch-Jacquotte; Joseph F Fraumeni; Robert N Hoover; Patricia Hartge; Stephen J Chanock
Journal:  Nat Genet       Date:  2010-01-24       Impact factor: 38.330

8.  Common variants near TERC are associated with mean telomere length.

Authors:  Veryan Codd; Massimo Mangino; Pim van der Harst; Peter S Braund; Michael Kaiser; Alan J Beveridge; Suzanne Rafelt; Jasbir Moore; Chris Nelson; Nicole Soranzo; Guangju Zhai; Ana M Valdes; Hannah Blackburn; Irene Mateo Leach; Rudolf A de Boer; Masayuki Kimura; Abraham Aviv; Alison H Goodall; Willem Ouwehand; Dirk J van Veldhuisen; Wiek H van Gilst; Gerjan Navis; Paul R Burton; Martin D Tobin; Alistair S Hall; John R Thompson; Tim Spector; Nilesh J Samani
Journal:  Nat Genet       Date:  2010-02-07       Impact factor: 38.330

9.  Population structure and eigenanalysis.

Authors:  Nick Patterson; Alkes L Price; David Reich
Journal:  PLoS Genet       Date:  2006-12       Impact factor: 5.917

10.  Human telomere length correlates to the size of the associated chromosome arm.

Authors:  Jasen L Wise; Richard J Crout; Daniel W McNeil; Robert J Weyant; Mary L Marazita; Sharon L Wenger
Journal:  PLoS One       Date:  2009-06-23       Impact factor: 3.240

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  59 in total

1.  Genetic variants in the TEP1 gene are associated with prostate cancer risk and recurrence.

Authors:  C Gu; Q Li; Y Zhu; Y Qu; G Zhang; M Wang; Y Yang; J Wang; L Jin; Q Wei; D Ye
Journal:  Prostate Cancer Prostatic Dis       Date:  2015-08-04       Impact factor: 5.554

2.  Telomere length varies by DNA extraction method: implications for epidemiologic research.

Authors:  Julie M Cunningham; Ruth A Johnson; Kristin Litzelman; Halcyon G Skinner; Songwon Seo; Corinne D Engelman; Russell J Vanderboom; Grace W Kimmel; Ronald E Gangnon; Douglas L Riegert-Johnson; John A Baron; John D Potter; Robert Haile; Daniel D Buchanan; Mark A Jenkins; David N Rider; Stephen N Thibodeau; Gloria M Petersen; Lisa A Boardman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2013-09-09       Impact factor: 4.254

3.  Estimating Telomere Length Heritability in an Unrelated Sample of Adults: Is Heritability of Telomere Length Modified by Life Course Socioeconomic Status?

Authors:  Jessica D Faul; Colter M Mitchell; Jennifer A Smith; Wei Zhao
Journal:  Biodemography Soc Biol       Date:  2016

Review 4.  Telomere shortening and Alzheimer's disease.

Authors:  Zhiyou Cai; Liang-Jun Yan; Anna Ratka
Journal:  Neuromolecular Med       Date:  2012-11-16       Impact factor: 3.843

5.  Meta-analysis of telomere length in 19,713 subjects reveals high heritability, stronger maternal inheritance and a paternal age effect.

Authors:  Linda Broer; Veryan Codd; Dale R Nyholt; Joris Deelen; Massimo Mangino; Gonneke Willemsen; Eva Albrecht; Najaf Amin; Marian Beekman; Eco J C de Geus; Anjali Henders; Christopher P Nelson; Claire J Steves; Margie J Wright; Anton J M de Craen; Aaron Isaacs; Mary Matthews; Alireza Moayyeri; Grant W Montgomery; Ben A Oostra; Jacqueline M Vink; Tim D Spector; P Eline Slagboom; Nicholas G Martin; Nilesh J Samani; Cornelia M van Duijn; Dorret I Boomsma
Journal:  Eur J Hum Genet       Date:  2013-01-16       Impact factor: 4.246

6.  Telomere length, telomere-related genes, and breast cancer risk: the breast cancer health disparities study.

Authors:  Andrew J Pellatt; Roger K Wolff; Gabriela Torres-Mejia; Esther M John; Jennifer S Herrick; Abbie Lundgreen; Kathy B Baumgartner; Anna R Giuliano; Lisa M Hines; Laura Fejerman; Richard Cawthon; Martha L Slattery
Journal:  Genes Chromosomes Cancer       Date:  2013-04-30       Impact factor: 5.006

Review 7.  Human RECQL5: guarding the crossroads of DNA replication and transcription and providing backup capability.

Authors:  Venkateswarlu Popuri; Takashi Tadokoro; Deborah L Croteau; Vilhelm A Bohr
Journal:  Crit Rev Biochem Mol Biol       Date:  2013-04-29       Impact factor: 8.250

Review 8.  Opportunities and challenges for selected emerging technologies in cancer epidemiology: mitochondrial, epigenomic, metabolomic, and telomerase profiling.

Authors:  Mukesh Verma; Muin J Khoury; John P A Ioannidis
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2012-12-14       Impact factor: 4.254

9.  Telomere length and risk of glioma.

Authors:  Farzana Walcott; Preetha Rajaraman; Shahinaz M Gadalla; Peter D Inskip; Mark P Purdue; Demetrius Albanes; Esther Orr; Immaculata De Vivo; Sharon A Savage
Journal:  Cancer Epidemiol       Date:  2013-11-11       Impact factor: 2.984

10.  CRR9/CLPTM1L regulates cell survival signaling and is required for Ras transformation and lung tumorigenesis.

Authors:  Michael A James; Haris G Vikis; Everett Tate; Amy L Rymaszewski; Ming You
Journal:  Cancer Res       Date:  2013-12-23       Impact factor: 12.701

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