Literature DB >> 2059583

Diagrammatic representation of the distribution of DNA bases and its applications.

C T Zhang1, R Zhang.   

Abstract

The frequencies of occurrence of the bases A, C, G and T (or U) in a DNA or mRNA sequence are denoted by a, c, g, t (or u), respectively. Since a + c + g + t = 1, the four real numbers are mapped into a point within a regular tetrahedron. The mapping points are then projected to some planes for further study. We have given several examples of application of this technique. As a by-product of an application we have found an empirical formula on the limit distribution of DNA bases for different kind of organisms, i.e. 1/4 less than or equal to a2 + c2 + g2 + t2 less than 1/3.

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Year:  1991        PMID: 2059583     DOI: 10.1016/0141-8130(91)90009-j

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  3 in total

1.  Analysis of distribution of bases in the coding sequences by a diagrammatic technique.

Authors:  C T Zhang; R Zhang
Journal:  Nucleic Acids Res       Date:  1991-11-25       Impact factor: 16.971

2.  Information theory based T7-like promoter models: classification of bacteriophages and differential evolution of promoters and their polymerases.

Authors:  Zehua Chen; Thomas D Schneider
Journal:  Nucleic Acids Res       Date:  2005-10-31       Impact factor: 16.971

3.  Recognition of Protein-coding Genes Based on Z-curve Algorithms.

Authors:  Feng -Biao Guo; Yan Lin; Ling -Ling Chen
Journal:  Curr Genomics       Date:  2014-04       Impact factor: 2.236

  3 in total

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